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insA3 IS1 family protein InsA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944951, updated on 4-Apr-2024

Summary

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Gene symbol
insA3
Gene description
IS1 family protein InsA
Primary source
ASAP:ABE-0000951
Locus tag
b0275
See related
ECOCYC:G6146
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0023
Summary
IS1 is inserted in 7 locations in MG1655, designated IS1ABCDEFH; IS1G is specific to the W3110 K-12 chromosome. [More information is available at EcoGene: EG60009]. IS1 is the smallest insertion sequence in Escherichia coli. [More information is available at EcoCyc: G6146].
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Genomic context

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Sequence:
NC_000913.3 (291071..291346, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ornithine carbamoyltransferase ArgF Neighboring gene putative translational regulatory protein ArgL Neighboring gene protein YkgS Neighboring gene IS1 family protein InsB Neighboring gene protein YagJ Neighboring gene uncharacterized protein YagK

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Involvement of two domains with helix-turn-helix and zinc finger motifs in the binding of IS1 transposase to terminal inverted repeats. Ohta S, et al. Mol Microbiol, 2004 Jul. PMID 15225314
  2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
  
involved_in DNA transposition IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in DNA transposition IEA
Inferred from Electronic Annotation
more info
  
involved_in transposition IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
IS1 family protein InsA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    291071..291346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414809.1 IS1 family protein InsA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414809.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A168PSS0, A0A2P9EA17, A0A376J3I9, A0A3S7M9V9, A0A6C7GZ69, A0A7G2KGX7, B7LJ08
    Conserved Domains (1) summary
    NF033558
    Location:8 → 91
    transpos_IS1; IS1 family transposase
Nucleotide Protein
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