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pspF DNA-binding transcriptional dual regulator PspF [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945683, updated on 23-Jun-2022

Summary

Gene symbol
pspF
Gene description
DNA-binding transcriptional dual regulator PspF
Primary source
ASAP:ABE-0004383
Locus tag
b1303
See related
ECOCYC:EG12344
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1298; ycjB
Summary
The transcription factor PspF, for "Phage shock protein F," is a bacterial enhancer-binding protein required for 54-dependent transcription activation . [More information is available at EcoCyc: EG12344].
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Genomic context

Sequence:
NC_000913.3 (1366935..1367912, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene gamma-glutamylputrescine oxidase Neighboring gene 4-aminobutyrate aminotransferase PuuE Neighboring gene phage shock protein A Neighboring gene phage shock protein B Neighboring gene phage shock protein C

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
DNA-binding transcriptional dual regulator PspF

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1366935..1367912 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415819.4 DNA-binding transcriptional dual regulator PspF [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415819.4

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P37344
    Conserved Domains (1) summary
    PRK11608
    Location:1325
    pspF; phage shock protein operon transcriptional activator; Provisional