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dcuD putative transporter DcuD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946575, updated on 23-Nov-2023

Summary

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Gene symbol
dcuD
Gene description
putative transporter DcuD
Primary source
ASAP:ABE-0010589
Locus tag
b3227
See related
ECOCYC:G7679
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3216; yhcL
Summary
IT (Ion Transporter) superfamily (Prakash, 2003). [More information is available at EcoGene: EG12818]. The DcuD protein is an uncharacterized member of the DcuC family of anaerobic dicarboxylate transporters . dcuD is either not expressed or is expressed under conditions unrelated to carboxylate metabolism. [More information is available at EcoCyc: G7679].
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Genomic context

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Sequence:
NC_000913.3 (3374869..3376236)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene N-acetylneuraminate lyase Neighboring gene NanR Neighboring gene ClpXP protease specificity-enhancing factor Neighboring gene stringent starvation protein A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for Escherichia coli DcuD carrier dependent F(O)F(1)-ATPase activity during fermentation of glycerol. Karapetyan L, et al. Sci Rep, 2019 Mar 12. PMID 30862913, Free PMC Article
  2. The dcuD (former yhcL) gene product of escherichia coli as a member of the DcuC family of C4-dicarboxylate carriers: lack of evident expression. Janausch IG, et al. Arch Microbiol, 1999 Oct. PMID 10525738
  3. Influence of C(4) -Dcu transporters on hydrogenase and formate dehydrogenase activities in stationary phase-grown fermenting Escherichia coli. Karapetyan L, et al. IUBMB Life, 2020 Aug. PMID 32277802
  4. DctA- and Dcu-independent transport of succinate in Escherichia coli: contribution of diffusion and of alternative carriers. Janausch IG, et al. Arch Microbiol, 2001 Sep. PMID 11511871
  5. Domain structure and pore loops in the 2-hydroxycarboxylate transporter family. Lolkema JS. J Mol Microbiol Biotechnol, 2006. PMID 17114896

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Influence of C4 -Dcu transporters on hydrogenase and formate dehydrogenase activities in stationary phase-grown fermenting Escherichia coli.
    Title: Influence of C(4) -Dcu transporters on hydrogenase and formate dehydrogenase activities in stationary phase-grown fermenting Escherichia coli.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables C4-dicarboxylate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in C4-dicarboxylate transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in C4-dicarboxylate transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within anaerobic glycerol catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
putative transporter DcuD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3374869..3376236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417694.1 putative transporter DcuD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417694.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376Y1P7
    Conserved Domains (1) summary
    PRK09804
    Location:1 → 455
    PRK09804; C4-dicarboxylate transporter DcuC
Nucleotide Protein
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