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yqiH putative fimbrial chaperone YqiH [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947531, updated on 6-Oct-2023

Summary

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Gene symbol
yqiH
Gene description
putative fimbrial chaperone YqiH
Primary source
ASAP:ABE-0010003
Locus tag
b3047
See related
ECOCYC:G7586
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3036
Summary
Probable false positive lipoprotein prediction, Cys not conserved. [More information is available at EcoGene: EG14229]. YqiH is a hypothetical protein. [More information is available at EcoCyc: G7586].
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Genomic context

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Sequence:
NC_000913.3 (3189881..3190630)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial protein YgiL Neighboring gene pseudo Neighboring gene IS2 insertion element repressor InsA Neighboring gene IS2 insertion element protein InsB Neighboring gene putative fimbrial protein YqiI Neighboring gene surface composition regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria. Holmgren A, et al. EMBO J, 1992 Apr. PMID 1348692, Free PMC Article
  2. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
  3. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
  4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in outer membrane-bounded periplasmic space IEA
Inferred from Electronic Annotation
more info
  
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative fimbrial chaperone YqiH

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3189881..3190630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_417519.4 putative fimbrial chaperone YqiH [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_417519.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X3JBX6
    Conserved Domains (1) summary
    COG3121
    Location:1 → 233
    FimC; P pilus assembly protein, chaperone PapD [Extracellular structures]
Nucleotide Protein
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