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rbsK ribokinase [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 948260, updated on 30-May-2019

Summary

Gene symbol
rbsK
Gene description
ribokinase
Primary source
EcoGene:EG10818
Locus tag
b3752
See related
ASAP:ABE-0012266; ECOCYC:EG10818
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK3746
Summary
HT_Cmplx20_Cyt: [More information is available at EcoGene: EG10818]. RbsK is a ribokinase that belongs to the ribokinase subfamily of sugar kinases . [More information is available at EcoCyc: EG10818].

Genomic context

Sequence:
NC_000913.3 (3937294..3938223)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribose ABC transporter membrane subunit Neighboring gene ribose ABC transporter periplasmic binding protein Neighboring gene DNA-binding transcriptional dual regulator RbsR Neighboring gene putative transporter HsrA Neighboring gene putative transcriptional regulator YieP

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from BioSystems

  • Pentose phosphate pathway, organism-specific biosystem (from KEGG)
    Pentose phosphate pathway, organism-specific biosystemThe pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathwa...
  • Pentose phosphate pathway, conserved biosystem (from KEGG)
    Pentose phosphate pathway, conserved biosystemThe pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathwa...
  • ribose degradation, organism-specific biosystem (from BIOCYC)
    ribose degradation, organism-specific biosystemD-ribose, which can serve as a total source of carbon and energy for E. coli, enters the cell via a high-affinity ABC transport system and hence in unphosphorylated form. The crystal structure of th...
  • ribose degradation, conserved biosystem (from BIOCYC)
    ribose degradation, conserved biosystemD-ribose, which can serve as a total source of carbon and energy for |FRAME:TAX-562|, enters the cell via a high-affinity ABC transport system and hence in unphosphorylated form. The crystal structu...

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
ribokinase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
D-ribose catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
carbohydrate phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    3937294..3938223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_418208.1 ribokinase [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_418208.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0A9J6
    Conserved Domains (1) summary
    PRK11142
    Location:4308
    PRK11142; ribokinase; Provisional
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