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LOC9638178 protein ARABIDILLO 1 [ Selaginella moellendorffii ]

Gene ID: 9638178, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9638178
Gene description
protein ARABIDILLO 1
Locus tag
SELMODRAFT_102329
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314287.1 (1832305..1835966, complement)

NW_003314287.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9638175 Neighboring gene E3 ubiquitin-protein ligase KEG Neighboring gene calcium-dependent protein kinase 19 Neighboring gene sodium/pyruvate cotransporter BASS2, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314287 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ARABIDILLO gene homologues in basal land plants: species-specific gene duplication and likely functional redundancy. Moody LA, et al. Planta, 2012 Dec. PMID 22945313

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ARABIDILLO 1
Names
SELAGIDILLO

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314287.1 Reference v1.0

    Range
    1832305..1835966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024679992.1 → XP_024535760.1  protein ARABIDILLO 1 isoform X2

    UniProtKB/TrEMBL
    I1VE54
    Conserved Domains (6) summary
    sd00034
    Location:93 → 117
    LRR_AMN1; leucine-rich repeat [structural motif]
    sd00043
    Location:592 → 622
    ARM; armadillo repeat [structural motif]
    pfam12937
    Location:53 → 97
    F-box-like
    cl25709
    Location:372 → 513
    Arm_3; Atypical Arm repeat
    cl27106
    Location:596 → 728
    PLN03200; cellulose synthase-interactive protein; Provisional
    cl28166
    Location:101 → 311
    AMN1; Antagonist of mitotic exit network protein 1

  2. XM_002975191.2 → XP_002975237.1  protein ARABIDILLO 1 isoform X1

    See identical proteins and their annotated locations for XP_002975237.1

    UniProtKB/TrEMBL
    D8RVV5, I1VE54
    Conserved Domains (5) summary
    cd09293
    Location:101 → 311
    AMN1; Antagonist of mitotic exit network protein 1
    cd00020
    Location:592 → 708
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00034
    Location:93 → 117
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:53 → 99
    F-box-like; F-box-like
    sd00043
    Location:592 → 622
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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