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4833439L19Rik RIKEN cDNA 4833439L19 gene [ Mus musculus (house mouse) ]

Gene ID: 97820, updated on 5-Mar-2024

Summary

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Official Symbol
4833439L19Rikprovided by MGI
Official Full Name
RIKEN cDNA 4833439L19 geneprovided by MGI
Primary source
MGI:MGI:1921162
See related
Ensembl:ENSMUSG00000025871 AllianceGenome:MGI:1921162
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Kiaa1191; P33monox; 4930558H15Rik
Summary
Predicted to enable oxidoreductase activity. Located in cytoplasm. Is expressed in several structures, including central nervous system; incisor; sensory organ; trigeminal nerve; and vibrissa. Orthologous to human KIAA1191 (KIAA1191). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in kidney adult (RPKM 208.4), large intestine adult (RPKM 47.6) and 27 other tissues See more
Orthologs
human all
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Genomic context

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Location:
13 B1; 13 28.79 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (54699031..54713195, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (54551218..54565382, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene THO complex 3 Neighboring gene STARR-positive B cell enhancer ABC_E10794 Neighboring gene predicted gene, 53205 Neighboring gene STARR-positive B cell enhancer ABC_E7241 Neighboring gene predicted gene 2830 Neighboring gene SUMO-interacting motifs containing 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:54666808-54666917 Neighboring gene predicted gene, 24195 Neighboring gene STARR-positive B cell enhancer ABC_E927 Neighboring gene ADP-ribosylation factor-like 10 Neighboring gene NOP16 nucleolar protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Characterizing the novel protein p33MONOX. Mishra M, et al. Mol Cell Biochem, 2011 Apr. PMID 21153684
  2. Identification and analysis of genes from the mouse otic vesicle and their association with developmental subprocesses through in situ hybridization. Powles N, et al. Dev Biol, 2004 Apr 1. PMID 15031102
  3. Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, et al. DNA Res, 2004 Jun 30. PMID 15368895
  4. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249
  5. BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. Magdaleno S, et al. PLoS Biol, 2006 Apr. PMID 16602821, Free PMC Article

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
putative monooxygenase p33MONOX

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001252645.1 → NP_001239574.1  putative monooxygenase p33MONOX isoform 2

    See identical proteins and their annotated locations for NP_001239574.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AK173126, BQ924175, BY265900, CD775737
    Consensus CDS
    CCDS56882.1
    UniProtKB/TrEMBL
    D3Z1F7
    Related
    ENSMUSP00000119874.2, ENSMUST00000153065.8
    Conserved Domains (1) summary
    pfam15302
    Location:1 → 284
    P33MONOX; P33 mono-oxygenase

  2. NM_001252646.1 → NP_001239575.1  putative monooxygenase p33MONOX isoform 2

    See identical proteins and their annotated locations for NP_001239575.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks two exons in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (2) has a shorter N-terminus, compared to isoform 1. Variants 2 and 3 encode the same isoform.
    Source sequence(s)
    AK169399, BY265900, CA461006, CD775737
    Consensus CDS
    CCDS56882.1
    UniProtKB/TrEMBL
    D3Z1F7
    Conserved Domains (1) summary
    pfam15302
    Location:1 → 284
    P33MONOX; P33 mono-oxygenase

  3. NM_001252647.1 → NP_001239576.1  putative monooxygenase p33MONOX isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks three exons in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (3) has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AK169399, BY244215, BY265900, CD775737
    UniProtKB/Swiss-Prot
    Q9DBN4
    Conserved Domains (1) summary
    pfam15302
    Location:1 → 198
    P33MONOX; P33 mono-oxygenase

  4. NM_001252648.1 → NP_001239577.1  putative monooxygenase p33MONOX isoform 4

    See identical proteins and their annotated locations for NP_001239577.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) lacks four exons in the 5' region, which results in a downstream AUG start codon, compared to variant 1. The resulting isoform (4) is much shorter at the N-terminus, compared to isoform 1.
    Source sequence(s)
    AK167616, BY265900, CD775737
    UniProtKB/Swiss-Prot
    Q9DBN4
    Conserved Domains (1) summary
    pfam15302
    Location:1 → 96
    P33MONOX; P33 mono-oxygenase

  5. NM_133797.4 → NP_598558.1  putative monooxygenase p33MONOX isoform 1

    See identical proteins and their annotated locations for NP_598558.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1).
    Source sequence(s)
    AK169399, BY064355, CD775737
    Consensus CDS
    CCDS26529.1
    UniProtKB/Swiss-Prot
    Q3TJ26, Q3UMA7, Q69ZP2, Q8C1J8, Q9D4T9, Q9DBN4
    Related
    ENSMUSP00000026989.9, ENSMUST00000026989.15
    Conserved Domains (1) summary
    pfam15302
    Location:17 → 303
    P33MONOX; P33 mono-oxygenase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    54699031..54713195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006517478.5 → XP_006517541.1  putative monooxygenase p33MONOX isoform X1

    See identical proteins and their annotated locations for XP_006517541.1

    UniProtKB/Swiss-Prot
    Q3TJ26, Q3UMA7, Q69ZP2, Q8C1J8, Q9D4T9, Q9DBN4
    Conserved Domains (1) summary
    pfam15302
    Location:17 → 303
    P33MONOX; P33 mono-oxygenase

  2. XM_006517479.5 → XP_006517542.1  putative monooxygenase p33MONOX isoform X2

    See identical proteins and their annotated locations for XP_006517542.1

    Conserved Domains (1) summary
    pfam15302
    Location:1 → 96
    P33MONOX; P33 mono-oxygenase
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9DBN4.1 GenPept UniProtKB/Swiss-Prot:Q9DBN4

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