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lmo0105 chitinase B [ Listeria monocytogenes EGD-e ]

Gene ID: 986634, updated on 6-Oct-2023

Summary

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Gene symbol
lmo0105
Gene description
chitinase B
Locus tag
lmo0105
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Listeria monocytogenes EGD-e (strain: EGD-e)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria
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Genomic context

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Sequence:
NC_003210.1 (110013..112283)

NC_003210.1Genomic Context describing neighboring genes Neighboring gene NADH oxidase Neighboring gene lmo0104 Neighboring gene transcriptional regulator Neighboring gene ABC transporter ATP-binding protein Neighboring gene ABC transporter ATP-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003210.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chitinase expression in Listeria monocytogenes is positively regulated by the Agr system. Paspaliari DK, et al. PLoS One, 2014. PMID 24752234, Free PMC Article
  2. Chitin hydrolysis by Listeria spp., including L. monocytogenes. Leisner JJ, et al. Appl Environ Microbiol, 2008 Jun. PMID 18424542, Free PMC Article
  3. Chitinase Expression in Listeria monocytogenes Is Influenced by lmo0327, Which Encodes an Internalin-Like Protein. Paspaliari DK, et al. Appl Environ Microbiol, 2017 Nov 15. PMID 28887418, Free PMC Article
  4. Listeria monocytogenes has a functional chitinolytic system and an active lytic polysaccharide monooxygenase. Paspaliari DK, et al. FEBS J, 2015 Mar. PMID 25565565
  5. The Listeria transcriptional landscape from saprophytism to virulence. Toledo-Arana A, et al. Nature, 2009 Jun 18. PMID 19448609

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The transcriptional level of chiA and chiB were dramatically decreased in the lmo0327 mutant.
    Title: Chitinase Expression in Listeria monocytogenes Is Influenced by lmo0327, Which Encodes an Internalin-Like Protein.
  2. Chitinase B is abundantly secreted in the presence of chitin, but unable efficiently hydrolyse chitooligosaccharide aldonic acids.
    Title: Listeria monocytogenes has a functional chitinolytic system and an active lytic polysaccharide monooxygenase.
  3. the expression of two chitinases is subject to regulation by the listerial agr system.
    Title: Chitinase expression in Listeria monocytogenes is positively regulated by the Agr system.
  4. In Listeria monocytogenes EGD, chitin hydrolysis depends on genes encoding two chitinases, lmo0105 (chiB) and lmo1883 (chiA), but not on a gene encoding a putative chitin binding protein (lmo2467).
    Title: Chitin hydrolysis by Listeria spp., including L. monocytogenes.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Names
chitinase B

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003210.1 Reference assembly

    Range
    110013..112283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_463638.1 chitinase B [Listeria monocytogenes EGD-e]

    See identical proteins and their annotated locations for NP_463638.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5M3EQK4, A0A9P1YMN1
    Conserved Domains (3) summary
    COG3325
    Location:1 → 480
    ChiA; Chitinase, GH18 family [Carbohydrate transport and metabolism]
    COG3979
    Location:616 → 756
    COG3979; Chitodextrinase [Carbohydrate transport and metabolism]
    cd20174
    Location:471 → 605
    GH18_LinChi78-like_UFR; an unknown function domain of Listeria innocua LinChi78 GH18 chitinase that is essential for its catalytic activity; found in similar chitinase-like proteins
Nucleotide Protein
Heading Accession and Version

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