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Golga2 golgi autoantigen, golgin subfamily a, 2 [ Mus musculus (house mouse) ]

Gene ID: 99412, updated on 23-Jun-2021

Summary

Official Symbol
Golga2provided by MGI
Official Full Name
golgi autoantigen, golgin subfamily a, 2provided by MGI
Primary source
MGI:MGI:2139395
See related
Ensembl:ENSMUSG00000002546
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
GM130; AW555139
Expression
Ubiquitous expression in ovary adult (RPKM 20.8), limb E14.5 (RPKM 16.9) and 28 other tissues See more
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Genomic context

See Golga2 in Genome Data Viewer
Location:
2; 2 B
Exon count:
27
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (32178299..32197925)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (32288287..32307913)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (32143773..32163441)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L36 pseudogene Neighboring gene SWI5 recombination repair homolog (yeast) Neighboring gene dynamin 1 Neighboring gene microRNA 3154 Neighboring gene microRNA 199b

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • KIAA4150

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables importin-alpha family protein binding IDA
Inferred from Direct Assay
more info
PubMed 
enables importin-alpha family protein binding ISO
Inferred from Sequence Orthology
more info
 
enables microtubule binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables protein-containing complex binding ISO
Inferred from Sequence Orthology
more info
 
enables syntaxin binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in Golgi disassembly ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within Golgi localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in asymmetric cell division IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cell cycle IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport ISO
Inferred from Sequence Orthology
more info
 
involved_in meiotic spindle assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mitotic spindle assembly ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of axonogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein homotetramerization ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in spindle assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle ISO
Inferred from Sequence Orthology
more info
 
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
PubMed 
is_active_in Golgi cis cisterna IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in Golgi cis cisterna ISO
Inferred from Sequence Orthology
more info
 
is_active_in Golgi cisterna membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in Golgi cisterna membrane ISO
Inferred from Sequence Orthology
more info
 
located_in Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in Golgi membrane TAS
Traceable Author Statement
more info
 
is_active_in cis-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cis-Golgi network IDA
Inferred from Direct Assay
more info
PubMed 
located_in cis-Golgi network ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
located_in mitotic spindle ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
part_of protein-containing complex ISO
Inferred from Sequence Orthology
more info
 
located_in spindle pole IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
golgin subfamily A member 2
Names
130 kDa cis-Golgi matrix protein
SY11 protein
golgin-95

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080968.2NP_001074437.2  golgin subfamily A member 2 isoform b

    Status: VALIDATED

    Source sequence(s)
    AL808027
    Consensus CDS
    CCDS38101.1
    Related
    ENSMUSP00000159316.2, ENSMUST00000239447.2
    Conserved Domains (2) summary
    TIGR02168
    Location:136467
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15070
    Location:369987
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  2. NM_001362695.2NP_001349624.2  golgin subfamily A member 2 isoform c

    Status: VALIDATED

    Source sequence(s)
    AL808027
    Conserved Domains (2) summary
    COG1196
    Location:194541
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15070
    Location:369987
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  3. NM_001362696.2NP_001349625.2  golgin subfamily A member 2 isoform d

    Status: VALIDATED

    Source sequence(s)
    AL808027
    Conserved Domains (2) summary
    COG1196
    Location:167514
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15070
    Location:342960
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  4. NM_001362697.2NP_001349626.2  golgin subfamily A member 2 isoform e

    Status: VALIDATED

    Source sequence(s)
    AL808027
    Related
    ENSMUSP00000080374.9, ENSMUST00000081670.14
    Conserved Domains (2) summary
    TIGR02168
    Location:104435
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15070
    Location:337955
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  5. NM_001362698.2NP_001349627.2  golgin subfamily A member 2 isoform f

    Status: VALIDATED

    Source sequence(s)
    AL808027
    Conserved Domains (2) summary
    COG1196
    Location:135482
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15070
    Location:310928
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  6. NM_133852.3NP_598613.3  golgin subfamily A member 2 isoform a

    Status: VALIDATED

    Source sequence(s)
    AL808027
    Consensus CDS
    CCDS38100.1
    Related
    ENSMUSP00000097768.4, ENSMUST00000100194.10
    Conserved Domains (2) summary
    TIGR02168
    Location:163494
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15070
    Location:3961014
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    32178299..32197925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006498491.4XP_006498554.1  golgin subfamily A member 2 isoform X2

    Conserved Domains (2) summary
    COG1196
    Location:193540
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15070
    Location:368986
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
  2. XM_017319359.2XP_017174848.1  golgin subfamily A member 2 isoform X1

    Conserved Domains (2) summary
    TIGR02168
    Location:143474
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    pfam15070
    Location:376994
    GOLGA2L5; Putative golgin subfamily A member 2-like protein 5
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