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    4930519F09Rik RIKEN cDNA 4930519F09 gene [ Mus musculus (house mouse) ]

    Gene ID: 114676, updated on 8-Feb-2024

    Summary

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    Official Symbol
    4930519F09Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930519F09 geneprovided by MGI
    Gene description
    pyruvate dehydrogenase E1 alpha 1 pseudogene
    Primary source
    MGI:MGI:2149783
    See related
    AllianceGenome:MGI:2149783
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EyeLinc9
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    Genomic context

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    See 4930519F09Rik in Genome Data Viewer
    Location:
    10 A4; 10 16.46 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (28797631..28799563, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (28921635..28923567, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_26159 Neighboring gene protein tyrosine phosphatase receptor type K Neighboring gene STARR-seq mESC enhancer starr_26161 Neighboring gene STARR-seq mESC enhancer starr_26163 Neighboring gene STARR-seq mESC enhancer starr_26164 Neighboring gene STARR-seq mESC enhancer starr_26167 Neighboring gene STARR-seq mESC enhancer starr_26168 Neighboring gene CapStarr-seq enhancer MGSCv37_chr10:28384986-28385169 Neighboring gene STARR-seq mESC enhancer starr_26169 Neighboring gene thymocyte selection associated Neighboring gene STARR-seq mESC enhancer starr_26170 Neighboring gene RIKEN cDNA 2310057J18 gene Neighboring gene splicing factor 3b, subunit 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. LHS1 and SIL1 provide a lumenal function that is essential for protein translocation into the endoplasmic reticulum. Tyson JR, et al. EMBO J, 2000 Dec 1. PMID 11101517, Free PMC Article
    2. Evolutionarily conserved long intergenic non-coding RNAs in the eye. Mustafi D, et al. Hum Mol Genet, 2013 Aug 1. PMID 23562822, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • pyruvate dehydrogenase E1 alpha 1 pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      28797631..28799563 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003948981.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_033601.1: Suppressed sequence

      Description
      NR_033601.1: This RefSeq was removed because currently there is not sufficient evidence for the transcript.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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