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    Gm12397 predicted gene 12397 [ Mus musculus (house mouse) ]

    Gene ID: 100039668, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm12397provided by MGI
    Official Full Name
    predicted gene 12397provided by MGI
    Gene description
    lysine (K)-specific demethylase 2B pseudogene
    Primary source
    MGI:MGI:3649202
    See related
    AllianceGenome:MGI:3649202
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Is expressed in bronchiole; lung epithelium; metanephros; and ureteric tip. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    4 A5; 4 20.63 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (40911693..40913357, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (40911693..40913357, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 Neighboring gene STARR-positive B cell enhancer mm9_chr4:40801010-40801311 Neighboring gene microRNA 5123 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:40822974-40823216 Neighboring gene STARR-positive B cell enhancer mm9_chr4:40823726-40824026 Neighboring gene predicted gene, 34289 Neighboring gene STARR-seq mESC enhancer starr_10005 Neighboring gene STARR-seq mESC enhancer starr_10006 Neighboring gene serine peptidase inhibitor, Kazal type 4 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:40895401-40895689 Neighboring gene BCL2-associated athanogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cellular heterogeneity in the ureteric progenitor niche and distinct profiles of branching morphogenesis in organ development. Rutledge EA, et al. Development, 2017 Sep 1. PMID 28705898, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • lysine (K)-specific demethylase 2B pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_012909.1 

      Range
      101..1765
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      40911693..40913357 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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