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    RAF1P1 RAF1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 348910, updated on 10-Oct-2023

    Summary

    Official Symbol
    RAF1P1provided by HGNC
    Official Full Name
    RAF1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:9830
    See related
    Ensembl:ENSG00000250040 AllianceGenome:HGNC:9830
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    Location:
    4p16.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (10254926..10256659, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (10230889..10232622, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (10256550..10258283, complement)

    Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15279 Neighboring gene uncharacterized LOC124900666 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21310 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21311 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:10124378-10124878 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:10124879-10125379 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:10130393-10131592 Neighboring gene developmental pluripotency associated 4 pseudogene Neighboring gene CRISPRi-validated cis-regulatory element chr4.979 Neighboring gene MX dynamin like GTPase 1 pseudogene Neighboring gene MX dynamin like GTPase 1 pseudogene

    Genomic regions, transcripts, and products

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association analysis of age at onset in schizophrenia in a European-American sample
    EBI GWAS Catalog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_003018.3 

      Range
      101..1834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

      Range
      10254926..10256659 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060928.1 Alternate T2T-CHM13v2.0

      Range
      10230889..10232622 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)