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    LOC729707 transmembrane O-mannosyltransferase targeting cadherins 4 pseudogene [ Homo sapiens (human) ]

    Gene ID: 729707, updated on 10-Oct-2023

    Summary

    Gene symbol
    LOC729707
    Gene description
    transmembrane O-mannosyltransferase targeting cadherins 4 pseudogene
    See related
    Ensembl:ENSG00000248560
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    Location:
    5q35.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (181114026..181115854)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (181674060..181675888)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (180541026..180542854)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene tRNA-Leu (anticodon AAG) 1-2 Neighboring gene tRNA-Val (anticodon CAC) 1-3 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180531361-180531862 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180531863-180532362 Neighboring gene olfactory receptor family 2 subfamily V member 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180556955-180557456 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180565055-180565554 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180574489-180575211 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:180577953-180578454 Neighboring gene olfactory receptor family 2 subfamily V member 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23775 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23776

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_021904.2 

      Range
      103..1931
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      181114026..181115854
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      181674060..181675888
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)