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Genes and mapped phenotypes

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Reference genome

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) reference genome

Severe acute respiratory syndrome coronavirus 2 (Host: human,vertebrates)

ssRNA(+)

RefSeq: NC_045512.2

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NCBI Datasets

Download a genome data package for the SARS-CoV-2 reference genome, including genome, CDS and protein sequences, an annotation report and a data report

File name

Assembly report

Total sequence length

29.9 kbp

Assembly level

Complete Genome

Total number of viral segments

1

Search results

Items: 1 to 20 of 591

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Name/Gene ID	Description	Location	Aliases	MIM
Select item 1956 EGFR ID: 1956	epidermal growth factor receptor [Homo sapiens (human)]	Chromosome 7, NC_000007.14 (55019017..55211628)	ERBB, ERBB1, ERRP, HER1, NISBD2, PIG61, mENA	131550
Select item 7124 TNF ID: 7124	tumor necrosis factor [Homo sapiens (human)]	Chromosome 6, NC_000006.12 (31575565..31578336)	DIF-alpha, TNFA, TNFSF2, TNLG1F, TNF	191160
Select item 7422 VEGFA ID: 7422	vascular endothelial growth factor A [Homo sapiens (human)]	Chromosome 6, NC_000006.12 (43770211..43786487)	L-VEGF, MVCD1, VEGF, VPF	192240
Select item 3569 IL6 ID: 3569	interleukin 6 [Homo sapiens (human)]	Chromosome 7, NC_000007.14 (22727200..22731998)	BSF-2, BSF2, CDF, HGF, HSF, IFN-beta-2, IFNB2, IL-6	147620
Select item 3586 IL10 ID: 3586	interleukin 10 [Homo sapiens (human)]	Chromosome 1, NC_000001.11 (206767602..206772494, complement)	CSIF, GVHDS, IL-10A, TGIF, IL10	124092
Select item 6774 STAT3 ID: 6774	signal transducer and activator of transcription 3 [Homo sapiens (human)]	Chromosome 17, NC_000017.11 (42313324..42388442, complement)	ADMIO, ADMIO1, APRF, HIES	102582
Select item 1636 ACE ID: 1636	angiotensin I converting enzyme [Homo sapiens (human)]	Chromosome 17, NC_000017.11 (63477061..63498373)	ACE1, CD143, DCP, DCP1	106180
Select item 1401 CRP ID: 1401	C-reactive protein [Homo sapiens (human)]	Chromosome 1, NC_000001.11 (159712289..159714589, complement)	PTX1	123260
Select item 4790 NFKB1 ID: 4790	nuclear factor kappa B subunit 1 [Homo sapiens (human)]	Chromosome 4, NC_000004.12 (102501359..102617302)	CVID12, EBP-1, KBF1, NF-kB, NF-kB1, NF-kappa-B1, NF-kappaB, NF-kappabeta, NFKB-p105, NFKB-p50, NFkappaB	164011
Select item 3553 IL1B ID: 3553	interleukin 1 beta [Homo sapiens (human)]	Chromosome 2, NC_000002.12 (112829751..112836779, complement)	IL-1, IL1-BETA, IL1F2, IL1beta	147720
Select item 3123 HLA-DRB1 ID: 3123	major histocompatibility complex, class II, DR beta 1 [Homo sapiens (human)]	Chromosome 6, NC_000006.12 (32578775..32589848, complement)	DRB1, HLA-DR1B, HLA-DRB, SS1	142857
Select item 7099 TLR4 ID: 7099	toll like receptor 4 [Homo sapiens (human)]	Chromosome 9, NC_000009.12 (117704403..117724735)	ARMD10, CD284, TLR-4, TOLL	603030
Select item 3576 CXCL8 ID: 3576	C-X-C motif chemokine ligand 8 [Homo sapiens (human)]	Chromosome 4, NC_000004.12 (73740569..73743716)	GCP-1, GCP1, IL8, LECT, LUCT, LYNAP, MDNCF, MONAP, NAF, NAP-1, NAP1, SCYB8	146930
Select item 2475 MTOR ID: 2475	mechanistic target of rapamycin kinase [Homo sapiens (human)]	Chromosome 1, NC_000001.11 (11106535..11262551, complement)	FRAP, FRAP1, FRAP2, RAFT1, RAPT1, SKS	601231
Select item 3458 IFNG ID: 3458	interferon gamma [Homo sapiens (human)]	Chromosome 12, NC_000012.12 (68154768..68159740, complement)	IFG, IFI, IMD69	147570
Select item 3717 JAK2 ID: 3717	Janus kinase 2 [Homo sapiens (human)]	Chromosome 9, NC_000009.12 (4984390..5129948)	JTK10	147796
Select item 3605 IL17A ID: 3605	interleukin 17A [Homo sapiens (human)]	Chromosome 6, NC_000006.12 (52186375..52190638)	CTLA-8, CTLA8, IL-17, IL-17A, IL17, ILA17	603149
Select item 6347 CCL2 ID: 6347	C-C motif chemokine ligand 2 [Homo sapiens (human)]	Chromosome 17, NC_000017.11 (34255285..34257203)	GDCF-2, HC11, HSMCR30, MCAF, MCP-1, MCP1, SCYA2, SMC-CF	158105
Select item 920 CD4 ID: 920	CD4 molecule [Homo sapiens (human)]	Chromosome 12, NC_000012.12 (6789528..6820799)	CD4mut, IMD79, Leu-3, OKT4D, T4	186940
Select item 5054 SERPINE1 ID: 5054	serpin family E member 1 [Homo sapiens (human)]	Chromosome 7, NC_000007.14 (101127104..101139247)	PAI, PAI-1, PAI1, PLANH1	173360