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    Fbxo16 F-box protein 16 [ Mus musculus (house mouse) ]

    Gene ID: 50759, updated on 23-Jun-2021

    Summary

    Official Symbol
    Fbxo16provided by MGI
    Official Full Name
    F-box protein 16provided by MGI
    Primary source
    MGI:MGI:1354706
    See related
    Ensembl:ENSMUSG00000034532
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fbx16; 4932435C24Rik
    Expression
    Broad expression in CNS E14 (RPKM 1.8), whole brain E14.5 (RPKM 1.7) and 15 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fbxo16 in Genome Data Viewer
    Location:
    14; 14 D1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (65504067..65561422)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (65266618..65323973)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (65885538..65940339)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 3 Neighboring gene predicted gene 9086 Neighboring gene predicted gene, 52141 Neighboring gene predicted gene, 41178 Neighboring gene predicted gene, 48449 Neighboring gene zinc finger protein 395 Neighboring gene prepronociceptin

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC144594

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360381.1NP_001347310.1  F-box only protein 16 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK164657, BC086690
    2. NM_001360383.1NP_001347312.1  F-box only protein 16 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AK164657, BC086690
      Consensus CDS
      CCDS88689.1
      Related
      ENSMUSP00000153094.2, ENSMUST00000226005.2
      Conserved Domains (1) summary
      pfam12937
      Location:92129
      F-box-like; F-box-like
    3. NM_015795.2NP_056610.1  F-box only protein 16 isoform 1

      See identical proteins and their annotated locations for NP_056610.1

      Status: VALIDATED

      Source sequence(s)
      AK164657, BC086690
      Consensus CDS
      CCDS36956.1
      UniProtKB/Swiss-Prot
      Q9QZM9
      UniProtKB/TrEMBL
      Q14BG9
      Related
      ENSMUSP00000153015.2, ENSMUST00000224629.2
      Conserved Domains (1) summary
      pfam12937
      Location:92135
      F-box-like; F-box-like

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      65504067..65561422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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