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    Aldh1b1 aldehyde dehydrogenase 1 family, member B1 [ Mus musculus (house mouse) ]

    Gene ID: 72535, updated on 23-Jun-2021

    Summary

    Official Symbol
    Aldh1b1provided by MGI
    Official Full Name
    aldehyde dehydrogenase 1 family, member B1provided by MGI
    Primary source
    MGI:MGI:1919785
    See related
    Ensembl:ENSMUSG00000035561
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2700007F14Rik
    Expression
    Biased expression in large intestine adult (RPKM 182.6), duodenum adult (RPKM 64.0) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Aldh1b1 in Genome Data Viewer
    Location:
    4; 4 B1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (45799022..45804608)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (45799022..45804608)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (45811894..45817480)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 31563 Neighboring gene predicted gene 12409 Neighboring gene insulin-like growth factor binding protein-like 1 Neighboring gene STRA6-like Neighboring gene coiled-coil domain containing 180

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC101971

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    aldehyde dehydrogenase X, mitochondrial
    Names
    aldehyde dehydrogenase family 1 member B1
    NP_082546.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028270.4NP_082546.1  aldehyde dehydrogenase X, mitochondrial precursor

      See identical proteins and their annotated locations for NP_082546.1

      Status: VALIDATED

      Source sequence(s)
      AK153416, AW555370, CJ158368
      Consensus CDS
      CCDS18139.1
      UniProtKB/Swiss-Prot
      Q9CZS1
      Related
      ENSMUSP00000041260.5, ENSMUST00000044384.5
      Conserved Domains (2) summary
      cd07141
      Location:33513
      ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
      PLN02466
      Location:22518
      PLN02466; aldehyde dehydrogenase family 2 member

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      45799022..45804608
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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