Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Ms4a19 membrane-spanning 4-domains, subfamily A, member 19 [ Mus musculus (house mouse) ]

    Gene ID: 69416, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ms4a19provided by MGI
    Official Full Name
    membrane-spanning 4-domains, subfamily A, member 19provided by MGI
    Primary source
    MGI:MGI:1916666
    See related
    Ensembl:ENSMUSG00000024728
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1700025F22Rik
    Expression
    Restricted expression toward testis adult (RPKM 16.9) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ms4a19 in Genome Data Viewer
    Location:
    19; 19 A
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (11117026..11142987, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (11139662..11165623, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11214173..11239810, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 pseudogene Neighboring gene membrane-spanning 4-domains, subfamily A, member 20 Neighboring gene NS1-associated protein 1 pseudogene Neighboring gene membrane-spanning 4-domains, subfamily A, member 13 Neighboring gene RIKEN cDNA 4930526L06 gene Neighboring gene membrane-spanning 4-domains, subfamily A, member 12

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC69416

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001370777.1NP_001357706.1  uncharacterized protein LOC69416 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC148321
      Conserved Domains (1) summary
      pfam04103
      Location:16121
      CD20; CD20-like family
    2. NM_027074.4NP_081350.1  uncharacterized protein LOC69416 isoform 2

      See identical proteins and their annotated locations for NP_081350.1

      Status: VALIDATED

      Source sequence(s)
      AC148321
      Consensus CDS
      CCDS50394.1
      UniProtKB/TrEMBL
      Q9D9Y7
      Related
      ENSMUSP00000077828.5, ENSMUST00000078770.5

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      11117026..11142987 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011247336.2XP_011245638.1  uncharacterized protein LOC69416 isoform X1

      See identical proteins and their annotated locations for XP_011245638.1

      Conserved Domains (1) summary
      pfam04103
      Location:16121
      CD20; CD20-like family
    2. XM_030251071.1XP_030106931.1  uncharacterized protein LOC69416 isoform X1

      Conserved Domains (1) summary
      pfam04103
      Location:16121
      CD20; CD20-like family
    3. XM_030251072.1XP_030106932.1  uncharacterized protein LOC69416 isoform X1

      Conserved Domains (1) summary
      pfam04103
      Location:16121
      CD20; CD20-like family
    Support Center