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    Lyzl1 lysozyme-like 1 [ Mus musculus (house mouse) ]

    Gene ID: 67328, updated on 23-Jun-2021

    Summary

    Official Symbol
    Lyzl1provided by MGI
    Official Full Name
    lysozyme-like 1provided by MGI
    Primary source
    MGI:MGI:1914578
    See related
    Ensembl:ENSMUSG00000024233
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Lyc2; Lyzd1; 1700038F02Rik
    Expression
    Restricted expression toward testis adult (RPKM 49.1) See more
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    Genomic context

    See Lyzl1 in Genome Data Viewer
    Location:
    18; 18 A1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (4165832..4182236)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (4165832..4182236)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (4165830..4182234)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene rhomboid-related protein 2 pseudogene Neighboring gene polycomb group RING finger protein 4 pseudogene Neighboring gene cadherin 11 pseudogene Neighboring gene predicted gene, 41657

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
     
    enables lysozyme activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    lysozyme-like protein 1
    Names
    lysozyme d1
    lysozyme-like protein 2
    NP_080368.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026092.3NP_080368.1  lysozyme-like protein 1 precursor

      See identical proteins and their annotated locations for NP_080368.1

      Status: PROVISIONAL

      Source sequence(s)
      AC123048
      Consensus CDS
      CCDS29035.1
      UniProtKB/Swiss-Prot
      Q9CPX3
      UniProtKB/TrEMBL
      A0A077S9Z4
      Related
      ENSMUSP00000025076.4, ENSMUST00000025076.10
      Conserved Domains (1) summary
      cd00119
      Location:20143
      LYZ1; C-type lysozyme (1, 4-beta-N-acetylmuramidase, LYZ) and alpha-lactalbumin (lactose synthase B protein, LA). They have a close evolutionary relationship and similar tertiary structure, however, functionally they are quite different. Lysozymes have ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      4165832..4182236
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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