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    Rps26 ribosomal protein S26 [ Mus musculus (house mouse) ]

    Gene ID: 27370, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rps26provided by MGI
    Official Full Name
    ribosomal protein S26provided by MGI
    Primary source
    MGI:MGI:1351628
    See related
    Ensembl:ENSMUSG00000025362
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in liver E14.5 (RPKM 610.3), liver E14 (RPKM 580.0) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Rps26 in Genome Data Viewer
    Location:
    10; 10 D3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (128460398..128462375, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (128624529..128626506, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (128061585..128063562, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene erb-b2 receptor tyrosine kinase 3 Neighboring gene microRNA 6917 Neighboring gene predicted gene 9182 Neighboring gene IKAROS family zinc finger 4 Neighboring gene predicted gene, 26876 Neighboring gene predicted gene, 51824

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables mRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in cytoplasmic translation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of RNA splicing ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    part_of cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of cytosolic small ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in polysomal ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013765.2NP_038793.2  40S ribosomal protein S26

      See identical proteins and their annotated locations for NP_038793.2

      Status: VALIDATED

      Source sequence(s)
      AK012722, AV585706, BU530648
      Consensus CDS
      CCDS36090.1
      UniProtKB/Swiss-Prot
      P62855
      UniProtKB/TrEMBL
      Q497N1
      Related
      ENSMUSP00000026420.6, ENSMUST00000026420.7
      Conserved Domains (1) summary
      pfam01283
      Location:1101
      Ribosomal_S26e; Ribosomal protein S26e

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      128460398..128462375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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