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    Cxcl14 chemokine (C-X-C motif) ligand 14 [ Mus musculus (house mouse) ]

    Gene ID: 57266, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cxcl14provided by MGI
    Official Full Name
    chemokine (C-X-C motif) ligand 14provided by MGI
    Primary source
    MGI:MGI:1888514
    See related
    Ensembl:ENSMUSG00000021508
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BR; KS1; Kec; BMAC; BRAK; MIP-; NJAC; Scyb1; MIP-2g; Scyb14; AI414372; bolekine; MIP2gamma; 1110031L23Rik; 1200006I23Rik
    Expression
    Broad expression in limb E14.5 (RPKM 108.6), bladder adult (RPKM 100.8) and 19 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Cxcl14 in Genome Data Viewer
    Location:
    13; 13 B1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (56436456..56444624, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (56288643..56296811, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (56390004..56397912, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930550C17 gene Neighboring gene neurogenin 1 Neighboring gene predicted gene, 17878 Neighboring gene predicted gene, 24716

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Clone Names

    • MGC90667

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables chemokine activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    C-X-C motif chemokine 14
    Names
    B-cell and monocyte-activating chemokine
    chemokine BRAK
    kidney-expressed chemokine CXC
    musculus CXC chemokine MIP-2gamma
    small inducible cytokine subfamily B (Cys-X-Cys), member 14
    small-inducible cytokine B14

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019568.2NP_062514.2  C-X-C motif chemokine 14 precursor

      See identical proteins and their annotated locations for NP_062514.2

      Status: VALIDATED

      Source sequence(s)
      AK076112, AU035952, BC079661, BI133967
      Consensus CDS
      CCDS36679.1
      UniProtKB/Swiss-Prot
      Q9WUQ5
      UniProtKB/TrEMBL
      Q6AXC2
      Related
      ENSMUSP00000021970.10, ENSMUST00000021970.11
      Conserved Domains (1) summary
      cl00134
      Location:2485
      Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      56436456..56444624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244545.3XP_011242847.1  C-X-C motif chemokine 14 isoform X1

      See identical proteins and their annotated locations for XP_011242847.1

      Conserved Domains (1) summary
      cl00134
      Location:2485
      Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...
    2. XM_006517307.5XP_006517370.1  C-X-C motif chemokine 14 isoform X1

      See identical proteins and their annotated locations for XP_006517370.1

      Conserved Domains (1) summary
      cl00134
      Location:2485
      Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...
    3. XM_006517308.5XP_006517371.1  C-X-C motif chemokine 14 isoform X2

      See identical proteins and their annotated locations for XP_006517371.1

      UniProtKB/Swiss-Prot
      Q9WUQ5
      Conserved Domains (1) summary
      cl00134
      Location:2485
      Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...
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