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    Ypel3 yippee like 3 [ Mus musculus (house mouse) ]

    Gene ID: 66090, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ypel3provided by MGI
    Official Full Name
    yippee like 3provided by MGI
    Primary source
    MGI:MGI:1913340
    See related
    Ensembl:ENSMUSG00000042675
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    S; Suap; 0610043B10Rik; 1190001G19Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 190.6), mammary gland adult (RPKM 124.4) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Ypel3 in Genome Data Viewer
    Location:
    7; 7 F3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (126376135..126379682)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (126776963..126780510)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (133920489..133924028)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 3 Neighboring gene glycerophosphodiester phosphodiesterase domain containing 3 Neighboring gene T-box 6 Neighboring gene protein phosphatase 4, catalytic subunit

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of cellular senescence ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein yippee-like 3
    Names
    small ubiquitinated apoptotic protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001379293.1NP_001366222.1  protein yippee-like 3 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) represents the longest transcript and encodes the longer isoform (a). Variants 1-5 all encode the same isoform (a).
      Source sequence(s)
      AC124505
      Conserved Domains (1) summary
      cl13152
      Location:21110
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains
    2. NM_001379294.1NP_001366223.1  protein yippee-like 3 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4), as well as variants 1-3 and 5, encodes the longer isoform (a).
      Source sequence(s)
      AC124505
      Conserved Domains (1) summary
      cl13152
      Location:21110
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains
    3. NM_001379295.1NP_001366224.1  protein yippee-like 3 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5), as well as variants 1-4, encodes the longer isoform (a).
      Source sequence(s)
      AC124505
      Related
      ENSMUSP00000101963.2, ENSMUST00000106356.2
      Conserved Domains (1) summary
      cl13152
      Location:21110
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains
    4. NM_001379296.1NP_001366225.1  protein yippee-like 3 isoform b

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6), as well as variant 7, encodes isoform b.
      Source sequence(s)
      AC124505
      Conserved Domains (1) summary
      cl13152
      Location:4881
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains
    5. NM_001379297.1NP_001366226.1  protein yippee-like 3 isoform b

      Status: VALIDATED

      Description
      Transcript Variant: This variant (7), as well as variant 6, encodes isoform b.
      Source sequence(s)
      AC124505
      Conserved Domains (1) summary
      cl13152
      Location:4881
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains
    6. NM_025347.3NP_079623.1  protein yippee-like 3 isoform a

      See identical proteins and their annotated locations for NP_079623.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2), as well as variants 1 and 3-5, encodes the longer isoform (a).
      Source sequence(s)
      AC124505
      Consensus CDS
      CCDS21842.1
      UniProtKB/Swiss-Prot
      P61237
      Related
      ENSMUSP00000037332.6, ENSMUST00000038614.12
      Conserved Domains (1) summary
      cl13152
      Location:21110
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains
    7. NM_026875.3NP_081151.2  protein yippee-like 3 isoform a

      See identical proteins and their annotated locations for NP_081151.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1), as well as variants 2-5, encodes the longer isoform (a).
      Source sequence(s)
      AC124505
      Consensus CDS
      CCDS21842.1
      UniProtKB/Swiss-Prot
      P61237
      Related
      ENSMUSP00000128753.2, ENSMUST00000170882.8
      Conserved Domains (1) summary
      cl13152
      Location:21110
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      126376135..126379682
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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