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    Jpt1 Jupiter microtubule associated homolog 1 [ Mus musculus (house mouse) ]

    Gene ID: 15374, updated on 23-Jun-2021

    Summary

    Official Symbol
    Jpt1provided by MGI
    Official Full Name
    Jupiter microtubule associated homolog 1provided by MGI
    Primary source
    MGI:MGI:1096361
    See related
    Ensembl:ENSMUSG00000020737
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hn; Hn1
    Expression
    Ubiquitous expression in whole brain E14.5 (RPKM 391.8), CNS E18 (RPKM 387.3) and 26 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Jpt1 in Genome Data Viewer
    Location:
    11 E2; 11 80.84 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (115388171..115405219, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (115497345..115514393, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (115358667..115375684, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 7 Neighboring gene ribosomal protein L39 pseudogene Neighboring gene 5',3'-nucleotidase, cytosolic Neighboring gene small ubiquitin-like modifier 2 Neighboring gene nucleoporin 85

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    jupiter microtubule associated homolog 1
    Names
    hematological and neurological expressed 1 protein
    hematological and neurological expressed sequence 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008258.2NP_032284.1  jupiter microtubule associated homolog 1

      See identical proteins and their annotated locations for NP_032284.1

      Status: VALIDATED

      Source sequence(s)
      AL645470
      Consensus CDS
      CCDS25638.1
      UniProtKB/Swiss-Prot
      P97825
      Related
      ENSMUSP00000021083.7, ENSMUST00000021083.7
      Conserved Domains (1) summary
      pfam17054
      Location:158
      JUPITER; Microtubule-Associated protein Jupiter

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      115388171..115405219 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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