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    Sult1c1 sulfotransferase family, cytosolic, 1C, member 1 [ Mus musculus (house mouse) ]

    Gene ID: 20888, updated on 6-May-2021

    Summary

    Official Symbol
    Sult1c1provided by MGI
    Official Full Name
    sulfotransferase family, cytosolic, 1C, member 1provided by MGI
    Primary source
    MGI:MGI:102928
    See related
    Ensembl:ENSMUSG00000023943
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    St; P-S; mOL; (PST; Stp2; Sult; ST1C1; (PST)G; P-SULT; mOLFST; Sult1a2
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Sult1c1 in Genome Data Viewer
    Location:
    17 C; 17 28.07 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (54268643..54297659, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (53961615..53990631, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (54100940..54129956, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene MAP/microtubule affinity regulating kinase 1, pseudogene 1 Neighboring gene creatine kinase, brain, pseudogene 1 Neighboring gene brain creatine kinase pseudogene Neighboring gene erythrocyte protein band 4.1-like 4b pseudogene Neighboring gene solute carrier family 5 (choline transporter), member 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables 3'-phosphoadenosine 5'-phosphosulfate binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables alcohol sulfotransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables aryl sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables aryl sulfotransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables aryl sulfotransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables bile-salt sulfotransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in 3'-phosphoadenosine 5'-phosphosulfate metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cholesterol metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in sulfation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within sulfur compound metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in sulfur compound metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in xenobiotic metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    sulfotransferase 1C1
    Names
    phenol sulfotransferase
    sulfotransferase family 1A, phenol-preferring, member 2
    NP_061221.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_018751.2NP_061221.2  sulfotransferase 1C1

      See identical proteins and their annotated locations for NP_061221.2

      Status: PROVISIONAL

      Source sequence(s)
      BC045149
      Consensus CDS
      CCDS28884.1
      UniProtKB/Swiss-Prot
      Q80VR3
      Related
      ENSMUSP00000024738.8, ENSMUST00000024738.8
      Conserved Domains (1) summary
      pfam00685
      Location:46297
      Sulfotransfer_1; Sulfotransferase domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      54268643..54297659 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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