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    Pcdhb10 protocadherin beta 10 [ Mus musculus (house mouse) ]

    Gene ID: 93881, updated on 23-Jun-2021

    Summary

    Official Symbol
    Pcdhb10provided by MGI
    Official Full Name
    protocadherin beta 10provided by MGI
    Primary source
    MGI:MGI:2136745
    See related
    Ensembl:ENSMUSG00000045657
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pcdhb; Pcdhb5; PcdhbJ; Pcdhb5D
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    Genomic context

    See Pcdhb10 in Genome Data Viewer
    Location:
    18; 18 B3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (37544727..37547567)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (37411674..37414514)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (37571328..37574168)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 37013 Neighboring gene predicted gene, 38666 Neighboring gene predicted gene, 38667 Neighboring gene protocadherin beta 8 Neighboring gene protocadherin beta 9 Neighboring gene protocadherin beta 11 Neighboring gene predicted gene, 20162

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in cell adhesion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053135.2NP_444365.1  protocadherin beta 10 precursor

      See identical proteins and their annotated locations for NP_444365.1

      Status: VALIDATED

      Source sequence(s)
      AY013771, BM942895, BY722394
      Consensus CDS
      CCDS29177.1
      UniProtKB/TrEMBL
      Q91VE5
      Related
      ENSMUSP00000056420.3, ENSMUST00000051126.4
      Conserved Domains (3) summary
      cd11304
      Location:247342
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam08266
      Location:31112
      Cadherin_2; Cadherin-like
      pfam16492
      Location:687769
      Cadherin_C_2; Cadherin cytoplasmic C-terminal

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      37544727..37547567
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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