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    Krt83 keratin 83 [ Mus musculus (house mouse) ]

    Gene ID: 100126226, updated on 23-Jun-2021

    Summary

    Official Symbol
    Krt83provided by MGI
    Official Full Name
    keratin 83provided by MGI
    Primary source
    MGI:MGI:3690448
    See related
    Ensembl:ENSMUSG00000067613
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    5430421N21Rik
    Expression
    Biased expression in subcutaneous fat pad adult (RPKM 3.0), ovary adult (RPKM 0.7) and 3 other tissues See more
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    Genomic context

    See Krt83 in Genome Data Viewer
    Location:
    15; 15 F2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101383011..101389393, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101485130..101491512, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101315561..101321937, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene keratin 81 Neighboring gene keratin 86 Neighboring gene type II keratin Kb32P Neighboring gene predicted gene, 53914 Neighboring gene keratin 85

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    type II hair keratin
    Names
    keratin type II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001201323.1NP_001188252.1  type II hair keratin

      Status: VALIDATED

      Source sequence(s)
      AI561926, AK133718
      Consensus CDS
      CCDS49735.1
      UniProtKB/TrEMBL
      E9Q1Y9
      Related
      ENSMUSP00000023718.8, ENSMUST00000023718.9
      Conserved Domains (3) summary
      pfam00038
      Location:103414
      Filament; Intermediate filament protein
      pfam16208
      Location:38100
      Keratin_2_head; Keratin type II head
      cl23720
      Location:313381
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      101383011..101389393 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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