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    Krt86 keratin 86 [ Mus musculus (house mouse) ]

    Gene ID: 16679, updated on 23-Jun-2021

    Summary

    Official Symbol
    Krt86provided by MGI
    Official Full Name
    keratin 86provided by MGI
    Primary source
    MGI:MGI:109362
    See related
    Ensembl:ENSMUSG00000067614
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Khb4; MHb4; Krt2-1; Krt2-10; Krt2-11; AI325212; 5430421N21Rik
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See Krt86 in Genome Data Viewer
    Location:
    15 F2; 15 56.9 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101371359..101377864)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101473478..101479983)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101303909..101310414)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene keratin 88 Neighboring gene keratin 81 Neighboring gene keratin 83 Neighboring gene type II keratin Kb32P

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
     
    located_in keratin filament IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    keratin, type II cuticular Hb6
    Names
    K86
    keratin complex 2, basic, gene 10
    type II hair keratin Hb6
    type-II keratin Kb26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010667.2NP_034797.1  keratin, type II cuticular Hb6

      See identical proteins and their annotated locations for NP_034797.1

      Status: PROVISIONAL

      Source sequence(s)
      AK161149
      Consensus CDS
      CCDS37218.1
      UniProtKB/Swiss-Prot
      P97861
      UniProtKB/TrEMBL
      B2RTB6
      Related
      ENSMUSP00000085365.4, ENSMUST00000088049.5
      Conserved Domains (3) summary
      pfam00038
      Location:105416
      Filament; Intermediate filament protein
      pfam16208
      Location:4102
      Keratin_2_head; Keratin type II head
      cl23720
      Location:315383
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      101371359..101377864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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