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    Krt82 keratin 82 [ Mus musculus (house mouse) ]

    Gene ID: 114566, updated on 23-Jun-2021

    Summary

    Official Symbol
    Krt82provided by MGI
    Official Full Name
    keratin 82provided by MGI
    Primary source
    MGI:MGI:2149248
    See related
    Ensembl:ENSMUSG00000049548
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Krt2-2; Krt2-20
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See Krt82 in Genome Data Viewer
    Location:
    15 F2; 15 56.9 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101449651..101459094, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101541216..101550659, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (101371647..101381090, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118568225 Neighboring gene keratin 85 Neighboring gene keratin 84 Neighboring gene keratin 90 Neighboring gene keratin 75

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC124293

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
     
    located_in keratin filament ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    keratin, type II cuticular Hb2
    Names
    K82
    keratin complex 2, basic, gene 20
    type II hair keratin Hb2
    type-II keratin Kb22

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053249.3NP_444479.2  keratin, type II cuticular Hb2

      See identical proteins and their annotated locations for NP_444479.2

      Status: VALIDATED

      Source sequence(s)
      AA607752, BC108971
      Consensus CDS
      CCDS27854.1
      UniProtKB/Swiss-Prot
      Q99M74
      Related
      ENSMUSP00000023713.8, ENSMUST00000023713.10
      Conserved Domains (2) summary
      pfam00038
      Location:118428
      Filament; Intermediate filament protein
      pfam16208
      Location:16114
      Keratin_2_head; Keratin type II head

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      101449651..101459094 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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