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    Ankrd33 ankyrin repeat domain 33 [ Mus musculus (house mouse) ]

    Gene ID: 208258, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ankrd33provided by MGI
    Official Full Name
    ankyrin repeat domain 33provided by MGI
    Primary source
    MGI:MGI:2443398
    See related
    Ensembl:ENSMUSG00000047034
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pa; Panky; Panky-a; A930021G21Rik
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See Ankrd33 in Genome Data Viewer
    Location:
    15; 15 F1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (101013625..101017923)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (101115744..101120028)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (100946186..100950459)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene fidgetin-like 2 Neighboring gene predicted gene, 53912 Neighboring gene predicted gene, 41402 Neighboring gene activin A receptor, type II-like 1 Neighboring gene activin A receptor, type 1B Neighboring gene microRNA 6962

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Clone Names

    • MGC31569

    General protein information

    Preferred Names
    photoreceptor ankyrin repeat protein
    Names
    ankyrin repeat domain-containing protein 33
    photorecptor ankyrin repeat protein A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355656.1NP_001342585.1  photoreceptor ankyrin repeat protein isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC104834
      Conserved Domains (2) summary
      cd00204
      Location:1118
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:2962
      ANK; ANK repeat [structural motif]
    2. NM_001374225.1NP_001361154.1  photoreceptor ankyrin repeat protein isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC104834
      Related
      ENSMUSP00000155584.2, ENSMUST00000229954.2
      Conserved Domains (4) summary
      sd00045
      Location:5385
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:58153
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:1873
      Ank_4; Ankyrin repeats (many copies)
      cl39094
      Location:127192
      Ank_2; Ankyrin repeats (3 copies)
    3. NM_144790.1NP_659039.1  photoreceptor ankyrin repeat protein isoform 1

      See identical proteins and their annotated locations for NP_659039.1

      Status: VALIDATED

      Source sequence(s)
      BC022726
      Consensus CDS
      CCDS27845.1
      UniProtKB/Swiss-Prot
      Q8BXP5
      Related
      ENSMUSP00000067028.7, ENSMUST00000070875.8
      Conserved Domains (3) summary
      cd00204
      Location:7128
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:10105
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:537
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      101013625..101017923
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036159294.1XP_036015187.1  photoreceptor ankyrin repeat protein isoform X1

      Conserved Domains (2) summary
      sd00045
      Location:2962
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:195
      Ank_2; Ankyrin repeats (3 copies)
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