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    Prol1 proline rich, lacrimal 1 [ Mus musculus (house mouse) ]

    Gene ID: 17830, updated on 20-Jul-2021

    Summary

    Official Symbol
    Prol1provided by MGI
    Official Full Name
    proline rich, lacrimal 1provided by MGI
    Primary source
    MGI:MGI:107496
    See related
    Ensembl:ENSMUSG00000064156
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Muc10
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See Prol1 in Genome Data Viewer
    Location:
    5; 5 E1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (88465171..88476676)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (88317312..88328817)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (88746337..88757842)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene submaxillary gland androgen regulated protein 2 like Neighboring gene RIKEN cDNA 1700041A01 gene Neighboring gene amelotin Neighboring gene chromobox protein homolog 3 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    mucin-7
    Names
    mucin 10, submandibular gland salivary mucin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008644.2NP_032670.2  mucin-7 precursor

      Status: VALIDATED

      Source sequence(s)
      AC163331
      Consensus CDS
      CCDS51537.1
      UniProtKB/TrEMBL
      E9PYQ4
      Related
      ENSMUSP00000132678.2, ENSMUST00000170832.3

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      88465171..88476676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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