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    Gatd3a glutamine amidotransferase like class 1 domain containing 3A [ Mus musculus (house mouse) ]

    Gene ID: 28295, updated on 23-Jun-2021

    Summary

    Official Symbol
    Gatd3aprovided by MGI
    Official Full Name
    glutamine amidotransferase like class 1 domain containing 3Aprovided by MGI
    Primary source
    MGI:MGI:1351861
    See related
    Ensembl:ENSMUSG00000053329
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    ES1; C21orf33; D10Jhu81e
    Expression
    Ubiquitous expression in adrenal adult (RPKM 190.1), heart adult (RPKM 107.5) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Gatd3a in Genome Data Viewer
    Location:
    10 C1; 10 39.72 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (77997900..78005589, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (78162066..78169755, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (77624812..77632513, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51775 Neighboring gene icos ligand Neighboring gene predicted gene, 47922 Neighboring gene PWP2 periodic tryptophan protein homolog (yeast) Neighboring gene trafficking protein particle complex 10

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrion HDA PubMed 
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial
    Names
    ES1 protein homolog, mitochondrial

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001364646.1NP_001351575.1  glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial isoform 2 precursor

      Status: VALIDATED

      Source sequence(s)
      AC164573
      Related
      ENSMUSP00000151605.2, ENSMUST00000219120.2
      Conserved Domains (1) summary
      cl00020
      Location:43233
      GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain
    2. NM_138601.3NP_613067.1  glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial isoform 1 precursor

      See identical proteins and their annotated locations for NP_613067.1

      Status: VALIDATED

      Source sequence(s)
      AI852165, AK003866
      Consensus CDS
      CCDS35957.1
      UniProtKB/Swiss-Prot
      Q9D172
      Related
      ENSMUSP00000001242.8, ENSMUST00000001242.9
      Conserved Domains (1) summary
      cd03133
      Location:43264
      GATase1_ES1; Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      77997900..78005589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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