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    Slc5a4b solute carrier family 5 (neutral amino acid transporters, system A), member 4b [ Mus musculus (house mouse) ]

    Gene ID: 64454, updated on 16-Oct-2021

    Summary

    Official Symbol
    Slc5a4bprovided by MGI
    Official Full Name
    solute carrier family 5 (neutral amino acid transporters, system A), member 4bprovided by MGI
    Primary source
    MGI:MGI:1890478
    See related
    Ensembl:ENSMUSG00000020226
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SAAT1; SGLT3b; pSGLT2; SGLT3-b; 2010104G07Rik
    Expression
    Biased expression in duodenum adult (RPKM 17.7), small intestine adult (RPKM 14.0) and 3 other tissues See more
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    Genomic context

    See Slc5a4b in Genome Data Viewer
    Location:
    10; 10 C1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (75894452..75946852, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (76058618..76111018, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (75521366..75573763, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene 5134 Neighboring gene microRNA 6409 Neighboring gene zinc finger protein 280B Neighboring gene predicted gene 16222 Neighboring gene solute carrier family 5 (neutral amino acid transporters, system A), member 4b pseudogene Neighboring gene solute carrier family 5, member 4a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General protein information

    Preferred Names
    solute carrier family 5 member 4b
    Names
    low affinity sodium-glucose cotransporter

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023219.2NP_075708.2  solute carrier family 5 member 4b

      See identical proteins and their annotated locations for NP_075708.2

      Status: VALIDATED

      Source sequence(s)
      AC140851, AV259402, BC109133
      Consensus CDS
      CCDS48603.1
      UniProtKB/TrEMBL
      Q2VPB3, Q91ZP4
      Related
      ENSMUSP00000113582.2, ENSMUST00000120757.2
      Conserved Domains (1) summary
      cl00456
      Location:27660
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      75894452..75946852 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011243522.1XP_011241824.1  solute carrier family 5 member 4b isoform X2

      Conserved Domains (1) summary
      cl00456
      Location:13511
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    2. XM_017314051.1XP_017169540.1  solute carrier family 5 member 4b isoform X3

      Conserved Domains (1) summary
      cl00456
      Location:1450
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    3. XM_006513945.2XP_006514008.1  solute carrier family 5 member 4b isoform X1

      Conserved Domains (1) summary
      cl00456
      Location:22520
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
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