Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Slc17a2 solute carrier family 17 (sodium phosphate), member 2 [ Mus musculus (house mouse) ]

    Gene ID: 218103, updated on 23-Jun-2021

    Summary

    Official Symbol
    Slc17a2provided by MGI
    Official Full Name
    solute carrier family 17 (sodium phosphate), member 2provided by MGI
    Primary source
    MGI:MGI:2443098
    See related
    Ensembl:ENSMUSG00000036110
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    NP; NPT3; C730032N17Rik
    Expression
    Biased expression in liver adult (RPKM 29.3), liver E18 (RPKM 6.3) and 1 other tissue See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Slc17a2 in Genome Data Viewer
    Location:
    13; 13 A3.1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (23990924..24009174)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (23806941..23825191)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (23898896..23915394)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene tripartite motif-containing 38 Neighboring gene predicted gene 11337 Neighboring gene solute carrier family 17 (sodium phosphate), member 3 Neighboring gene solute carrier family 17 (sodium phosphate), member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Clone Names

    • MGC19073

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables sialic acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in anion transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sialic acid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in integral component of membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    sodium-dependent phosphate transport protein 3
    Names
    Na(+)/PI cotransporter 3
    sodium/phosphate cotransporter 3
    solute carrier family 17 member 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001377113.1NP_001364042.1  sodium-dependent phosphate transport protein 3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AL590388
      Related
      ENSMUSP00000097288.3, ENSMUST00000099697.3
      Conserved Domains (1) summary
      cd17318
      Location:21462
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters
    2. NM_144836.3NP_659085.1  sodium-dependent phosphate transport protein 3 isoform 2

      See identical proteins and their annotated locations for NP_659085.1

      Status: VALIDATED

      Source sequence(s)
      AL590388
      Consensus CDS
      CCDS36620.1
      UniProtKB/Swiss-Prot
      Q5SZA1
      Related
      ENSMUSP00000006786.5, ENSMUST00000006786.11
      Conserved Domains (1) summary
      cd17318
      Location:21434
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      23990924..24009174
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516646.2XP_006516709.1  sodium-dependent phosphate transport protein 3 isoform X1

      Conserved Domains (1) summary
      cd17318
      Location:21464
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters
    2. XM_006516654.4XP_006516717.1  sodium-dependent phosphate transport protein 3 isoform X9

      Conserved Domains (1) summary
      cl28910
      Location:21312
      MFS; Major Facilitator Superfamily
    3. XM_006516649.2XP_006516712.1  sodium-dependent phosphate transport protein 3 isoform X3

      Conserved Domains (1) summary
      cd17318
      Location:21435
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters
    4. XM_006516651.3XP_006516714.1  sodium-dependent phosphate transport protein 3 isoform X5

      Conserved Domains (1) summary
      cd17318
      Location:21436
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters
    5. XM_006516653.4XP_006516716.1  sodium-dependent phosphate transport protein 3 isoform X7

      Conserved Domains (1) summary
      cl28910
      Location:21312
      MFS; Major Facilitator Superfamily
    6. XM_036157986.1XP_036013879.1  sodium-dependent phosphate transport protein 3 isoform X8

      Conserved Domains (1) summary
      cl28910
      Location:21310
      MFS; Major Facilitator Superfamily
    7. XM_006516648.4XP_006516711.1  sodium-dependent phosphate transport protein 3 isoform X2

      See identical proteins and their annotated locations for XP_006516711.1

      UniProtKB/Swiss-Prot
      Q5SZA1
      Conserved Domains (1) summary
      cd17318
      Location:21462
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters
    8. XM_006516650.4XP_006516713.1  sodium-dependent phosphate transport protein 3 isoform X4

      Conserved Domains (1) summary
      cd17318
      Location:21433
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters
    9. XM_006516652.3XP_006516715.1  sodium-dependent phosphate transport protein 3 isoform X6

      See identical proteins and their annotated locations for XP_006516715.1

      UniProtKB/Swiss-Prot
      Q5SZA1
      Conserved Domains (1) summary
      cd17318
      Location:21434
      MFS_SLC17; Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters

    RNA

    1. XR_003950445.1 RNA Sequence

    2. XR_382067.2 RNA Sequence

    Support Center