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    Ms4a10 membrane-spanning 4-domains, subfamily A, member 10 [ Mus musculus (house mouse) ]

    Gene ID: 69826, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ms4a10provided by MGI
    Official Full Name
    membrane-spanning 4-domains, subfamily A, member 10provided by MGI
    Primary source
    MGI:MGI:1917076
    See related
    Ensembl:ENSMUSG00000024731
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010001N17Rik
    Expression
    Biased expression in duodenum adult (RPKM 138.7), small intestine adult (RPKM 67.1) and 1 other tissue See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ms4a10 in Genome Data Viewer
    Location:
    19; 19 A
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (10939653..10952088, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (10962289..10974724, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11036783..11049160, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene zona pellucida glycoprotein 1 Neighboring gene prostaglandin D2 receptor 2 Neighboring gene coiled-coil domain containing 86 Neighboring gene membrane-spanning 4-domains, subfamily A, member 15 Neighboring gene membrane-spanning 4-domains, subfamily A, member 18

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    membrane-spanning 4-domains subfamily A member 10

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001379527.1NP_001366456.1  membrane-spanning 4-domains subfamily A member 10 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC148991
      Conserved Domains (1) summary
      pfam04103
      Location:57187
      CD20; CD20-like family
    2. NM_023529.3NP_076018.2  membrane-spanning 4-domains subfamily A member 10 isoform 1

      See identical proteins and their annotated locations for NP_076018.2

      Status: VALIDATED

      Source sequence(s)
      AC148991, AF237918
      Consensus CDS
      CCDS37919.1
      UniProtKB/Swiss-Prot
      Q99N03
      UniProtKB/TrEMBL
      B2RWS0
      Related
      ENSMUSP00000072531.7, ENSMUST00000072748.13
      Conserved Domains (1) summary
      pfam04103
      Location:57187
      CD20; CD20-like family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      10939653..10952088 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527329.3XP_006527392.1  membrane-spanning 4-domains subfamily A member 10 isoform X1

      See identical proteins and their annotated locations for XP_006527392.1

      UniProtKB/Swiss-Prot
      Q99N03
      Related
      ENSMUSP00000140111.2, ENSMUST00000191343.7
    2. XM_011247338.2XP_011245640.1  membrane-spanning 4-domains subfamily A member 10 isoform X2

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