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    Ltb4r1 leukotriene B4 receptor 1 [ Mus musculus (house mouse) ]

    Gene ID: 16995, updated on 22-Aug-2021

    Summary

    Official Symbol
    Ltb4r1provided by MGI
    Official Full Name
    leukotriene B4 receptor 1provided by MGI
    Primary source
    MGI:MGI:1309472
    See related
    Ensembl:ENSMUSG00000046908
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    BL; BLT; mBL; BLT1; BLTR; Ltb4r; mBLTR
    Expression
    Biased expression in duodenum adult (RPKM 10.3), small intestine adult (RPKM 8.5) and 12 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ltb4r1 in Genome Data Viewer
    Location:
    14 C3; 14 28.19 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (56003419..56005949)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (55765962..55768492)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (56384799..56387329)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene NOP9 nucleolar protein Neighboring gene cell death-inducing DNA fragmentation factor, alpha subunit-like effector B Neighboring gene leukotriene B4 receptor 2 Neighboring gene adenylate cyclase 4 Neighboring gene predicted gene, 32092 Neighboring gene receptor-interacting serine-threonine kinase 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled peptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables leukotriene B4 receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables leukotriene B4 receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables leukotriene receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in neuropeptide signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within signal transduction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane raft ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    leukotriene B4 receptor 1
    Names
    LTB4 receptor
    LTB4-R 1
    LTB4-R1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008519.2NP_032545.1  leukotriene B4 receptor 1

      See identical proteins and their annotated locations for NP_032545.1

      Status: VALIDATED

      Source sequence(s)
      AF044030, BY201185
      Consensus CDS
      CCDS27129.1
      UniProtKB/Swiss-Prot
      O88855
      UniProtKB/TrEMBL
      A7VJD3
      Related
      ENSMUSP00000051368.4, ENSMUST00000057569.4
      Conserved Domains (1) summary
      pfam00001
      Location:37285
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      56003419..56005949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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