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    Apobec4 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative) [ Mus musculus (house mouse) ]

    Gene ID: 71281, updated on 23-Jun-2021

    Summary

    Official Symbol
    Apobec4provided by MGI
    Official Full Name
    apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)provided by MGI
    Primary source
    MGI:MGI:1918531
    See related
    Ensembl:ENSMUSG00000055547
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4933431M11Rik
    Expression
    Restricted expression toward testis adult (RPKM 23.3) See more
    Orthologs
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    Genomic context

    See Apobec4 in Genome Data Viewer
    Location:
    1; 1 G3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (152626302..152633295)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (152750551..152757544)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (154597681..154604674)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene ral guanine nucleotide dissociation stimulator,-like 1 Neighboring gene predicted gene, 51749 Neighboring gene ornithine decarboxylase, structural 1 pseudogene Neighboring gene actin related protein 2/3 complex, subunit 5 Neighboring gene neutrophil cytosolic factor 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    acts_upstream_of_or_within mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    putative C->U-editing enzyme APOBEC-4
    Names
    apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 4
    NP_001074666.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081197.1NP_001074666.1  putative C->U-editing enzyme APOBEC-4

      See identical proteins and their annotated locations for NP_001074666.1

      Status: PROVISIONAL

      Source sequence(s)
      AC123613
      Consensus CDS
      CCDS35738.1
      Related
      ENSMUSP00000069723.5, ENSMUST00000068875.5
      Conserved Domains (2) summary
      pfam08210
      Location:47203
      APOBEC_N; APOBEC-like N-terminal domain
      cl21470
      Location:192255
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      152626302..152633295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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