Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Capza3 capping protein (actin filament) muscle Z-line, alpha 3 [ Mus musculus (house mouse) ]

    Gene ID: 12344, updated on 23-Jun-2021

    Summary

    Official Symbol
    Capza3provided by MGI
    Official Full Name
    capping protein (actin filament) muscle Z-line, alpha 3provided by MGI
    Primary source
    MGI:MGI:106221
    See related
    Ensembl:ENSMUSG00000041791
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ca; Gsg; rep; Gsg3; Tex8; 510-4; Cappa3; repro32
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Capza3 in Genome Data Viewer
    Location:
    6 G2; 6 69.77 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (139987283..139988563)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (140041557..140042837)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (139990046..139991310)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53305 Neighboring gene phospholipase C, zeta 1 Neighboring gene predicted gene, 44156 Neighboring gene predicted gene, 38917

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Chemically induced (ENU) (1) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within actin filament capping IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in actin filament organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in barbed-end actin filament capping IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within cytoplasm organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within spermatid development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of F-actin capping protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in acrosomal vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in actin cortical patch IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cortical cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in sperm head IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    F-actin-capping protein subunit alpha-3
    Names
    capZ alpha-3
    capping protein alpha 3
    cp alpha3
    germ cell-specific protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007605.5NP_031631.3  F-actin-capping protein subunit alpha-3

      See identical proteins and their annotated locations for NP_031631.3

      Status: VALIDATED

      Source sequence(s)
      AC158625
      Consensus CDS
      CCDS20672.1
      UniProtKB/Swiss-Prot
      P70190
      Related
      ENSMUSP00000038562.5, ENSMUST00000043797.6
      Conserved Domains (1) summary
      pfam01267
      Location:15274
      F-actin_cap_A; F-actin capping protein alpha subunit

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      139987283..139988563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center