Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Dexi dexamethasone-induced transcript [ Mus musculus (house mouse) ]

    Gene ID: 58239, updated on 23-Jun-2021

    Summary

    Official Symbol
    Dexiprovided by MGI
    Official Full Name
    dexamethasone-induced transcriptprovided by MGI
    Primary source
    MGI:MGI:1926236
    See related
    Ensembl:ENSMUSG00000038055
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Myle; AI836170; AW413143; D16Bwg0586e; 1810029J14Rik
    Expression
    Ubiquitous expression in ovary adult (RPKM 13.7), thymus adult (RPKM 11.8) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Dexi in Genome Data Viewer
    Location:
    16 A1; 16 5.67 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (10348071..10360918, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (10530207..10543054, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (10530300..10543147, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41420 Neighboring gene uncharacterized LOC115488669 Neighboring gene class II transactivator Neighboring gene C-type lectin domain family 16, member A Neighboring gene predicted gene, 52264 Neighboring gene predicted gene 15558

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Endonuclease-mediated (1)  1 citation

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    dexamethasone-induced protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021428.4NP_067403.2  dexamethasone-induced protein

      See identical proteins and their annotated locations for NP_067403.2

      Status: VALIDATED

      Source sequence(s)
      AF152470, AK007644
      Consensus CDS
      CCDS37252.1
      UniProtKB/Swiss-Prot
      Q9WUQ7
      Related
      ENSMUSP00000047676.6, ENSMUST00000038281.6
      Conserved Domains (1) summary
      pfam15198
      Location:195
      Dexa_ind; Dexamethasone-induced

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      10348071..10360918 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center