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    Slc15a5 solute carrier family 15, member 5 [ Mus musculus (house mouse) ]

    Gene ID: 277898, updated on 23-Jun-2021

    Summary

    Official Symbol
    Slc15a5provided by MGI
    Official Full Name
    solute carrier family 15, member 5provided by MGI
    Primary source
    MGI:MGI:3607714
    See related
    Ensembl:ENSMUSG00000044378
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    9830102E05Rik
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Slc15a5 in Genome Data Viewer
    Location:
    6; 6 G1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (137960584..138056914, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (137983586..138079916, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (137932111..138028437, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene deoxyribose-phosphate aldolase (putative) Neighboring gene predicted gene, 38552 Neighboring gene microsomal glutathione S-transferase 1 Neighboring gene predicted gene, 30213

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within peptide transport IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    solute carrier family 15 member 5

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177787.4NP_808455.2  solute carrier family 15 member 5

      See identical proteins and their annotated locations for NP_808455.2

      Status: PROVISIONAL

      Source sequence(s)
      AC121849, AC132431
      UniProtKB/Swiss-Prot
      Q8CBB2
      Related
      ENSMUSP00000129239.2, ENSMUST00000171804.4
      Conserved Domains (1) summary
      cl21472
      Location:100481
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      137960584..138056914 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017321607.2XP_017177096.1  solute carrier family 15 member 5 isoform X1

      Related
      ENSMUST00000050132.10
      Conserved Domains (1) summary
      cl28910
      Location:1398
      MFS; Major Facilitator Superfamily
    2. XM_017321608.2XP_017177097.1  solute carrier family 15 member 5 isoform X2

      Conserved Domains (1) summary
      cl28910
      Location:1322
      MFS; Major Facilitator Superfamily
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