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    6820431F20Rik RIKEN cDNA 6820431F20 gene [ Mus musculus (house mouse) ]

    Gene ID: 547150, updated on 23-Jun-2021

    Summary

    Official Symbol
    6820431F20Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 6820431F20 geneprovided by MGI
    Gene description
    cadherin 11 pseudogene
    Primary source
    MGI:MGI:3694236
    See related
    Ensembl:ENSMUSG00000071796
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 56.4), CNS E18 (RPKM 42.7) and 27 other tissues See more
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    Genomic context

    See 6820431F20Rik in Genome Data Viewer
    Location:
    8; 8 A1.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (20143848..20172994)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (20268286..20297432, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (19863864..19893010, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein S7 pseudogene Neighboring gene POTE ankyrin domain family member B Neighboring gene NSFL1 (p97) cofactor (p47) pseudogene Neighboring gene predicted gene, 40468 Neighboring gene RIKEN cDNA 9530057J20 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_030708.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152164
      Related
      ENSMUST00000153748.2

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      20143848..20172994
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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