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    Retnlg resistin like gamma [ Mus musculus (house mouse) ]

    Gene ID: 245195, updated on 6-May-2021

    Summary

    Official Symbol
    Retnlgprovided by MGI
    Official Full Name
    resistin like gammaprovided by MGI
    Primary source
    MGI:MGI:2667763
    See related
    Ensembl:ENSMUSG00000022651
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rel; Xcp; Fizz; Xcp1; Fizz3; Relmg
    Expression
    Biased expression in liver E18 (RPKM 61.3), subcutaneous fat pad adult (RPKM 16.4) and 3 other tissues See more
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    Genomic context

    See Retnlg in Genome Data Viewer
    Location:
    16 B5; 16 30.75 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (48692971..48694861)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (48872608..48874498)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (48872721..48874611)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene resistin like beta Neighboring gene resistin like alpha Neighboring gene DAZ interacting protein 3, zinc finger Neighboring gene predicted gene, 22576 Neighboring gene cell proliferation regulating inhibitor of protein phosphatase 2A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within myeloid dendritic cell chemotaxis IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in extracellular space IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    resistin-like gamma
    Names
    RELMgamma
    resistin-like molecule gamma
    ten-cysteine protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181596.4NP_853627.2  resistin-like gamma precursor

      See identical proteins and their annotated locations for NP_853627.2

      Status: VALIDATED

      Source sequence(s)
      AJ536019, BX631439, BY236131, DY246276
      Consensus CDS
      CCDS49865.1
      UniProtKB/Swiss-Prot
      Q8K426
      Related
      ENSMUSP00000070238.5, ENSMUST00000065666.6
      Conserved Domains (1) summary
      pfam06954
      Location:29116
      Resistin; Resistin

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      48692971..48694861
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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