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    Gm21953 predicted gene, 21953 [ Mus musculus (house mouse) ]

    Gene ID: 621580, updated on 8-Feb-2024

    Summary

    Official Symbol
    Gm21953provided by MGI
    Official Full Name
    predicted gene, 21953provided by MGI
    Primary source
    MGI:MGI:5439404
    See related
    Ensembl:ENSMUSG00000094695 AllianceGenome:MGI:5439404
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm13308
    Expression
    Biased expression in testis adult (RPKM 137.7), cortex adult (RPKM 26.1) and 6 other tissues See more
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    Genomic context

    See Gm21953 in Genome Data Viewer
    Location:
    4 A5; 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (42293864..42294898)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (42293864..42294898)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 21B (leucine) Neighboring gene predicted gene, 50470 Neighboring gene small inducible cytokine A19, pseudogene 1 Neighboring gene spermatogenesis associated 31 subfamily F member 1C Neighboring gene predicted gene 21980 Neighboring gene predicted gene, 46892 Neighboring gene protein FAM205A-like Neighboring gene predicted gene, 21586

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General protein information

    Preferred Names
    C-C motif chemokine 27-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177580.1NP_001171051.1  C-C motif chemokine 27-like

      See identical proteins and their annotated locations for NP_001171051.1

      Status: VALIDATED

      Source sequence(s)
      AL844494, BY102321
      Consensus CDS
      CCDS57271.1
      UniProtKB/TrEMBL
      A2APU9, F6T205
      Related
      ENSMUSP00000158629.2, ENSMUST00000238203.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      42293864..42294898
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)