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    Lce3b late cornified envelope 3B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100361859, updated on 13-Apr-2024

    Summary

    Official Symbol
    Lce3bprovided by RGD
    Official Full Name
    late cornified envelope 3Bprovided by RGD
    Primary source
    RGD:2319318
    See related
    Ensembl:ENSRNOG00000067521 AllianceGenome:RGD:2319318
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Lce3c; Lce3d
    Expression
    Restricted expression toward (RPKM 40.7) See more
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    Genomic context

    Location:
    2q34
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (181245939..181247060)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (178550333..178551454)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (193248807..193249881)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene serine hydroxymethyltransferase 2, pseudogene 1 Neighboring gene late cornified envelope protein 3B-like Neighboring gene U6 spliceosomal RNA Neighboring gene late cornified envelope 3E like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    late cornified envelope 3D
    Names
    late cornified envelope 3C
    late cornified envelope protein 3D-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001402584.1NP_001389513.1  late cornified envelope 3D

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000002
      UniProtKB/TrEMBL
      A0A8I6AH24
      Related
      ENSRNOP00000094114.1, ENSRNOT00000109216.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      181245939..181247060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)