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    1700097N02Rik RIKEN cDNA 1700097N02 gene [ Mus musculus (house mouse) ]

    Gene ID: 67522, updated on 8-Feb-2024

    Summary

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    Official Symbol
    1700097N02Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700097N02 geneprovided by MGI
    Primary source
    MGI:MGI:1914772
    See related
    Ensembl:ENSMUSG00000099474 AllianceGenome:MGI:1914772
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Biased expression in thymus adult (RPKM 24.9), testis adult (RPKM 22.4) and 9 other tissues See more
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    Genomic context

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    See 1700097N02Rik in Genome Data Viewer
    Location:
    17 A3.3; 17 15.71 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (30841415..30845879, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (30622441..30626905, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene BTB domain containing 9 Neighboring gene ribosomal protein S17 pseudogene Neighboring gene VISTA enhancer mm1326 Neighboring gene STARR-positive B cell enhancer ABC_E2480 Neighboring gene STARR-positive B cell enhancer ABC_E8666 Neighboring gene 40S ribosomal protein S13 pseudogene Neighboring gene glyoxalase 1 Neighboring gene dynein, axonemal, heavy chain 8 Neighboring gene predicted gene, 24661 Neighboring gene predicted gene, 41561

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Screening of genes involved in chromosome segregation during meiosis I: toward the identification of genes responsible for infertility in humans. Kogo H, et al. J Hum Genet, 2010 May. PMID 20339383
    2. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
    3. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_045287.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC165962, AK007099, CJ141521
      Related
      ENSMUST00000188852.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      30841415..30845879 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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