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    Tyms-ps thymidylate synthase, pseudogene [ Mus musculus (house mouse) ]

    Gene ID: 22172, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Tyms-psprovided by MGI
    Official Full Name
    thymidylate synthase, pseudogeneprovided by MGI
    Primary source
    MGI:MGI:98879
    See related
    AllianceGenome:MGI:98879
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    Location:
    10 C1; 10 43.7 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (87802533..87803879)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (87966671..87968017)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA lysine 21 (anticodon TTT) Neighboring gene insulin-like growth factor 1, opposite strand Neighboring gene VISTA enhancer mm694 Neighboring gene insulin-like growth factor 1 Neighboring gene STARR-seq mESC enhancer starr_27486 Neighboring gene STARR-seq mESC enhancer starr_27487 Neighboring gene STARR-seq mESC enhancer starr_27490 Neighboring gene STARR-seq mESC enhancer starr_27491 Neighboring gene predicted gene, 30233 Neighboring gene PARP1 binding protein Neighboring gene pro-melanin-concentrating hormone

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A mouse thymidylate synthase pseudogene derived from an aberrantly processed RNA molecule. Li DW, et al. Gene, 1989 Oct 30. PMID 2573561
    2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_000040.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC139754

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      87802533..87803879
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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