Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cyp2f2 cytochrome P450, family 2, subfamily f, polypeptide 2 [ Mus musculus (house mouse) ]

    Gene ID: 13107, updated on 6-May-2021

    Summary

    Official Symbol
    Cyp2f2provided by MGI
    Official Full Name
    cytochrome P450, family 2, subfamily f, polypeptide 2provided by MGI
    Primary source
    MGI:MGI:88608
    See related
    Ensembl:ENSMUSG00000052974
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Cyp2; Cyp2f
    Expression
    Biased expression in lung adult (RPKM 1746.8), liver adult (RPKM 856.2) and 1 other tissue See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cyp2f2 in Genome Data Viewer
    Location:
    7; 7 A3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (26819380..26833085)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (27119955..27133660)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (27904974..27918679)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene apoptosis inhibitor 5 pseudogene Neighboring gene predicted gene, 29754 Neighboring gene cytochrome P450, family 2, subfamily t, polypeptide 4 Neighboring gene egl-9 family hypoxia-inducible factor 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1)  1 citation
    • Endonuclease-mediated (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in epoxygenase P450 pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in exogenous drug catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in naphthalene catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within naphthalene catabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within naphthalene catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in naphthalene catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in organic acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within response to toxic substance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within trichloroethylene metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in xenobiotic metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    cytochrome P450 2F2
    Names
    CYPIIF2
    cytochrome P450, 2f2
    cytochrome P450-NAH-2
    naphthalene dehydrogenase
    naphthalene hydroxylase

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007817.2NP_031843.2  cytochrome P450 2F2 precursor

      See identical proteins and their annotated locations for NP_031843.2

      Status: VALIDATED

      Source sequence(s)
      AC157553, BU148924, CB595035, CK626215
      Consensus CDS
      CCDS21010.1
      UniProtKB/Swiss-Prot
      P33267
      Related
      ENSMUSP00000003100.9, ENSMUST00000003100.10
      Conserved Domains (1) summary
      pfam00067
      Location:31488
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      26819380..26833085
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center