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    Pbld2 phenazine biosynthesis-like protein domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 67307, updated on 23-Jun-2021

    Summary

    Official Symbol
    Pbld2provided by MGI
    Official Full Name
    phenazine biosynthesis-like protein domain containing 2provided by MGI
    Primary source
    MGI:MGI:1914557
    See related
    Ensembl:ENSMUSG00000020072
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mawbp; 3110049J23Rik
    Expression
    Biased expression in liver adult (RPKM 25.9), large intestine adult (RPKM 8.4) and 6 other tissues See more
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    Genomic context

    See Pbld2 in Genome Data Viewer
    Location:
    10; 10 B4
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (62856086..62894592)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (63024053..63058813)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (62487260..62521560)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene DNA replication helicase/nuclease 2 Neighboring gene RUN and FYVE domain-containing 2 Neighboring gene heterogeneous nuclear ribonucleoprotein H3 Neighboring gene predicted gene 16143 Neighboring gene phenazine biosynthesis-like protein domain containing 1 Neighboring gene atonal bHLH transcription factor 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 
    • Endonuclease-mediated (3) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables isomerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    phenazine biosynthesis-like domain-containing protein 2
    Names
    MAWD binding protein homolog 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026085.2NP_080361.1  phenazine biosynthesis-like domain-containing protein 2

      See identical proteins and their annotated locations for NP_080361.1

      Status: PROVISIONAL

      Source sequence(s)
      AK014198
      Consensus CDS
      CCDS23894.1
      UniProtKB/Swiss-Prot
      Q9CXN7
      Related
      ENSMUSP00000020262.5, ENSMUST00000020262.5
      Conserved Domains (1) summary
      cl29427
      Location:9284
      PhzC-PhzF; Phenazine biosynthesis-like protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      62856086..62894592
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036155961.1XP_036011854.1  phenazine biosynthesis-like domain-containing protein 2 isoform X4

      Conserved Domains (1) summary
      cl29427
      Location:9284
      PhzC-PhzF; Phenazine biosynthesis-like protein
    2. XM_006513981.4XP_006514044.1  phenazine biosynthesis-like domain-containing protein 2 isoform X1

      See identical proteins and their annotated locations for XP_006514044.1

      Conserved Domains (1) summary
      cl29427
      Location:70345
      PhzC-PhzF; Phenazine biosynthesis-like protein
    3. XM_006513982.5XP_006514045.1  phenazine biosynthesis-like domain-containing protein 2 isoform X2

      Conserved Domains (1) summary
      cl29427
      Location:63338
      PhzC-PhzF; Phenazine biosynthesis-like protein
    4. XM_006513983.2XP_006514046.1  phenazine biosynthesis-like domain-containing protein 2 isoform X3

      Conserved Domains (1) summary
      cl29427
      Location:46321
      PhzC-PhzF; Phenazine biosynthesis-like protein
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