Eola1 endothelium and lymphocyte associated ASCH domain 1 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Eola1provided by MGI
Official Full Name: endothelium and lymphocyte associated ASCH domain 1provided by MGI
Primary source: MGI:MGI:1915868
See related: Ensembl:ENSMUSG00000045237 AllianceGenome:MGI:1915868
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: 1110012L19Rik
Summary: Is expressed in diencephalon; esophagus; lung; naris; and urethra. Orthologous to several human genes including EOLA1 (endothelium and lymphocyte associated ASCH domain 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Ubiquitous expression in bladder adult (RPKM 10.9), CNS E18 (RPKM 9.1) and 27 other tissues See more
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Genomic context

Location:: X A7.2; X 36.02 cM

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	X	NC_000086.8 (69429519..69433022)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	X	NC_000086.7 (70385913..70389416)

Chromosome X - NC_000086.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics (MGI)

Endonuclease-mediated (1)

General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: protein EOLA1

Names: endothelial-overexpressed lipopolysaccharide-associated factor 1; uncharacterized protein CXorf40 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_026787.2 → NP_081063.1 protein EOLA1

See identical proteins and their annotated locations for NP_081063.1

Status: PROVISIONAL

Source sequence(s)

AK003642

Consensus CDS

CCDS30174.1

UniProtKB/Swiss-Prot

A2AF50, Q3TDX9, Q9D1F3

Related

ENSMUSP00000052765.6, ENSMUST00000053981.6

Conserved Domains (1) summary

cl01020
Location:4 → 57

ASCH; ASC-1 homology or ASCH domain, a small beta-barrel domain found in all three kingdoms of life. ASCH resembles the RNA-binding PUA domain and may also interact with RNA. ASCH has been proposed to function as an RNA-binding domain during coactivation, ...