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    Ms4a13 membrane-spanning 4-domains, subfamily A, member 13 [ Mus musculus (house mouse) ]

    Gene ID: 73466, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ms4a13provided by MGI
    Official Full Name
    membrane-spanning 4-domains, subfamily A, member 13provided by MGI
    Primary source
    MGI:MGI:1920716
    See related
    Ensembl:ENSMUSG00000057240
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tetm4.2; 1700060E18Rik
    Expression
    Restricted expression toward testis adult (RPKM 36.1) See more
    Orthologs
    NEW
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    Genomic context

    See Ms4a13 in Genome Data Viewer
    Location:
    19; 19 A
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (11146782..11174101, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (11169418..11196737, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11243908..11271213, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene membrane-spanning 4-domains, subfamily A, member 20 Neighboring gene NS1-associated protein 1 pseudogene Neighboring gene membrane-spanning 4-domains, subfamily A, member 19 Neighboring gene RIKEN cDNA 4930526L06 gene Neighboring gene membrane-spanning 4-domains, subfamily A, member 12 Neighboring gene membrane-spanning 4-domains, subfamily A, member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    membrane-spanning 4-domains subfamily A member 13
    Names
    testis-expressed transmembrane 4
    testis-expressed transmembrane protein 4.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001347435.1NP_001334364.1  membrane-spanning 4-domains subfamily A member 13 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AF544402, AK006841
      Consensus CDS
      CCDS84420.1
      UniProtKB/Swiss-Prot
      Q5FWC3
      Related
      ENSMUSP00000140293.2, ENSMUST00000188464.2
    2. NM_198224.3NP_937867.2  membrane-spanning 4-domains subfamily A member 13 isoform 1

      See identical proteins and their annotated locations for NP_937867.2

      Status: VALIDATED

      Source sequence(s)
      AC134839, AC148321
      Consensus CDS
      CCDS29595.1
      UniProtKB/Swiss-Prot
      Q5FWC3
      Related
      ENSMUSP00000073095.7, ENSMUST00000073380.13
      Conserved Domains (1) summary
      pfam04103
      Location:15117
      CD20; CD20-like family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      11146782..11174101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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