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    Ms4a18 membrane-spanning 4-domains, subfamily A, member 18 [ Mus musculus (house mouse) ]

    Gene ID: 76002, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ms4a18provided by MGI
    Official Full Name
    membrane-spanning 4-domains, subfamily A, member 18provided by MGI
    Primary source
    MGI:MGI:1923252
    See related
    Ensembl:ENSMUSG00000094584
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    5033428B15Rik
    Expression
    Biased expression in large intestine adult (RPKM 56.0), duodenum adult (RPKM 24.1) and 1 other tissue See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Ms4a18 in Genome Data Viewer
    Location:
    19; 19 A
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (10974388..10995390, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (10997024..11018026, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11071518..11092453, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene membrane-spanning 4-domains, subfamily A, member 10 Neighboring gene membrane-spanning 4-domains, subfamily A, member 15 Neighboring gene predicted gene 28347 Neighboring gene expressed sequence AW112010

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    membrane-spanning 4-domains subfamily A member 18

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001251849.1NP_001238778.1  membrane-spanning 4-domains subfamily A member 18

      See identical proteins and their annotated locations for NP_001238778.1

      Status: VALIDATED

      Source sequence(s)
      AC148991, AK017199
      Consensus CDS
      CCDS57137.1
      UniProtKB/TrEMBL
      J3QN01
      Related
      ENSMUSP00000136529.2, ENSMUST00000177684.3
      Conserved Domains (1) summary
      pfam04103
      Location:152233
      CD20; CD20-like family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      10974388..10995390 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006527428.2XP_006527491.1  membrane-spanning 4-domains subfamily A member 18 isoform X1

      See identical proteins and their annotated locations for XP_006527491.1

      UniProtKB/TrEMBL
      J3QN01
      Conserved Domains (1) summary
      pfam04103
      Location:152233
      CD20; CD20-like family
    2. XM_006527429.2XP_006527492.1  membrane-spanning 4-domains subfamily A member 18 isoform X2

      Conserved Domains (1) summary
      pfam04103
      Location:155191
      CD20; CD20-like family
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