Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rasl10b RAS-like, family 10, member B [ Mus musculus (house mouse) ]

    Gene ID: 276952, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rasl10bprovided by MGI
    Official Full Name
    RAS-like, family 10, member Bprovided by MGI
    Primary source
    MGI:MGI:2685575
    See related
    Ensembl:ENSMUSG00000020684
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm729; VTS586; VTS58635; B230331P10Rik
    Expression
    Biased expression in frontal lobe adult (RPKM 63.2), cortex adult (RPKM 46.5) and 7 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rasl10b in Genome Data Viewer
    Location:
    11; 11 C
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (83299963..83311865)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (83409137..83421039)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (83223574..83234540)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene expressed sequence AA465934 Neighboring gene expressed sequence AI450353 Neighboring gene peroxisomal biogenesis factor 12 Neighboring gene small nucleolar RNA, C/D box 7 Neighboring gene adaptor-related protein complex 2, beta 1 subunit Neighboring gene predicted gene, 23951 Neighboring gene RIKEN cDNA 1700020L24 gene Neighboring gene growth arrest-specific 2 like 2 Neighboring gene matrix metallopeptidase 28 (epilysin)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    ras-like protein family member 10B
    NP_001013404.1
    NP_001348495.1
    NP_001348496.1
    NP_001348497.1
    XP_030101915.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013386.3NP_001013404.1  ras-like protein family member 10B isoform 1

      See identical proteins and their annotated locations for NP_001013404.1

      Status: VALIDATED

      Source sequence(s)
      AL663096
      Consensus CDS
      CCDS25163.1
      UniProtKB/Swiss-Prot
      Q5SSG5
      Related
      ENSMUSP00000132696.2, ENSMUST00000164425.2
      Conserved Domains (1) summary
      cd04142
      Location:5203
      RRP22; Ras-related protein on chromosome 22 (RRP22) family
    2. NM_001361566.1NP_001348495.1  ras-like protein family member 10B isoform 1

      Status: VALIDATED

      Source sequence(s)
      AK045997, AK158941, AW456843, BC116407, BY277818
      Consensus CDS
      CCDS25163.1
      Related
      ENSMUSP00000021022.4, ENSMUST00000021022.10
      Conserved Domains (1) summary
      cd04142
      Location:5203
      RRP22; Ras-related protein on chromosome 22 (RRP22) family
    3. NM_001361567.1NP_001348496.1  ras-like protein family member 10B isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK045997, AK158941, AW456843
      Consensus CDS
      CCDS88208.1
      Related
      ENSMUSP00000135803.2, ENSMUST00000175848.8
      Conserved Domains (1) summary
      cl21455
      Location:5117
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    4. NM_001361568.1NP_001348497.1  ras-like protein family member 10B isoform 1

      Status: VALIDATED

      Source sequence(s)
      AK045997, AK158941, AW456843, BE995698
      Consensus CDS
      CCDS25163.1
      Related
      ENSMUSP00000103775.4, ENSMUST00000108140.10
      Conserved Domains (1) summary
      cd04142
      Location:5203
      RRP22; Ras-related protein on chromosome 22 (RRP22) family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      83299963..83311865
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030246055.2XP_030101915.1  ras-like protein family member 10B isoform X1

      Conserved Domains (1) summary
      cd04142
      Location:5203
      RRP22; Ras-related protein on chromosome 22 (RRP22) family
    Support Center